RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	C1orf185	Q5T7R7	199 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	PRAMEF9	Q5VWM5	478 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SLC22A10	Q63ZE4	541 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	WDR53	Q7Z5U6	358 aa	Predicted RBP	10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ZC3HC1	Q86WB0	502 aa	Known RBP	10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	TGIF2LY	Q8IUE0	185 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	OR4N5	Q8IXE1	308 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SNX31	Q8N9S9	440 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	GOLM1	Q8NBJ4	401 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SLC2A12	Q8TD20	617 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	KIAA1191	Q96A73	305 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SARAF	Q96BY9	339 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	RUNDC3B	Q96NL0	473 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	FOXC2	Q99958	501 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	MAPKAP1	Q9BPZ7	522 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	EML6	Q6ZMW3	1958 aa		10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	PHF3	Q92576	2039 aa	Known RBP	10.51	□□□□□ -0.73
PTP4A2-211	ENST00000528840	PRRC2A	P48634	2157 aa	Known RBP	10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ZNF407	Q9C0G0	2248 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	RTCA	O00442	366 aa	Known RBP	10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	WDR1	O75083	606 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SH3BGRL	O75368	114 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	KLK2	P20151	261 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	UQCRC1	P31930	480 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	HSPA7	P48741	367 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SLC12A2	P55011	1212 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	PPP2R2A	P63151	447 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	DOC2A	Q14183	400 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	MORF4L2	Q15014	288 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	TGFBI	Q15582	683 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	HIST2H2AC	Q16777	129 aa	Predicted RBP	10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	HYAL4	Q2M3T9	481 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ADPRM	Q3LIE5	342 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	STEAP4	Q687X5	459 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	HIST2H2AA3	Q6FI13	130 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	UBE3D	Q7Z6J8	389 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ADAMTSL2	Q86TH1	951 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	GPSM1	Q86YR5	675 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SLC35F6	Q8N357	371 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ACOT4	Q8N9L9	421 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	CHDH	Q8NE62	594 aa	Predicted RBP	10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	OR8K3	Q8NH51	312 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	DOK4	Q8TEW6	326 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ZNF721	Q8TF20	911 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SLCO2A1	Q92959	643 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ANKRD9	Q96BM1	317 aa	Predicted RBP	10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	PPWD1	Q96BP3	646 aa	Known RBP	10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SENP5	Q96HI0	755 aa	Predicted RBP	10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	VPS39	Q96JC1	886 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	CAPZA3	Q96KX2	299 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	GPATCH1	Q9BRR8	931 aa	Known RBP	10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	WDR83	Q9BRX9	315 aa	Known RBP	10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	PITHD1	Q9GZP4	211 aa	Predicted RBP	10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	LYRM4	Q9HD34	91 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	DNAJC11	Q9NVH1	559 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ZNF358	Q9NW07	568 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	WWOX	Q9NZC7	414 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	GPRC5B	Q9NZH0	403 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SPRR3	Q9UBC9	169 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	COPS7A	Q9UBW8	275 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ST6GALNAC2	Q9UJ37	374 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ATG4B	Q9Y4P1	393 aa		10.5	□□□□□ -0.73
PTP4A2-211	ENST00000528840	FAM221A	A4D161	298 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SYNDIG1L	A6NDD5	238 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SYT5	O00445	386 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	HCN1	O60741	890 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	PIAS1	O75925	651 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	TGFB1	P01137	390 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	RFPL3S	P0C7P2	107 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	GABRA1	P14867	456 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	HOXB4	P17483	251 aa	Predicted RBP	10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ATP5A1	P25705	553 aa	Known RBP	10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	GGT5	P36269	586 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	KCNC1	P48547	511 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	CEBPE	Q15744	281 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	MPEG1	Q2M385	716 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	AP5B1	Q2VPB7	878 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ZNF791	Q3KP31	576 aa	Predicted RBP	10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SLC25A35	Q3KQZ1	300 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	SULT1C3	Q6IMI6	304 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	KLHL7	Q8IXQ5	586 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	TCAIM	Q8N3R3	496 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	GOT1L1	Q8NHS2	421 aa	Predicted RBP	10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	NINJ1	Q92982	152 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	LRRC39	Q96DD0	335 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	PTCD3	Q96EY7	689 aa	Known RBP	10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	RBM18	Q96H35	190 aa	Known RBP	10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	JSRP1	Q96MG2	331 aa	Predicted RBP	10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	DGAT2	Q96PD7	388 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	KCNC2	Q96PR1	638 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	KRT12	Q99456	494 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	TBCD	Q9BTW9	1192 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	ROGDI	Q9GZN7	287 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	CXXC4	Q9H2H0	198 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	EHD1	Q9H4M9	534 aa		10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	GSX1	Q9H4S2	264 aa	Predicted RBP	10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	CNOT10	Q9H9A5	744 aa	Known RBP	10.49	□□□□□ -0.73
PTP4A2-211	ENST00000528840	RASSF1	Q9NS23	344 aa		10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms