RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 CDCA4Q9BXL8 241 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 ZCCHC2Q9C0B9 1178 aaKnown RBP17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 TMEM98Q9Y2Y6 226 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 ARHGAP33O14559 1287 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 SH3BP5O60239 455 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 C6P13671 934 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 MNX1P50219 401 aaPredicted RBP17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 MANFP55145 182 aaKnown RBP17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 ST8SIA6P61647 398 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 ZNF45Q02386 682 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 HSPB3Q12988 150 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 SSX1Q16384 188 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 UNC5DQ6UXZ4 953 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 WDR53Q7Z5U6 358 aaPredicted RBP17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 ARRDC3Q96B67 414 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 PDXPQ96GD0 296 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 F2RL3Q96RI0 385 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 WFDC6Q9BQY6 131 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 KLK4Q9Y5K2 254 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 A3GALT2U3KPV4 340 aa17.94■□□□□ 0.46
TM9SF1-206ENST00000528669 PSMD11O00231 422 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 PI15O43692 258 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 LZTS3O60299 673 aaPredicted RBP17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 LINC00271P0C7V0 271 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 CKMT1AP12532 417 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 CCL5P13501 91 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 DDX6P26196 483 aaKnown RBP eCLIP17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 OPRD1P41143 372 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 PRKCDQ05655 676 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 DHCR24Q15392 516 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 ZNF697Q5TEC3 545 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 PLAG1Q6DJT9 500 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 ATCAYQ86WG3 371 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 C9orf43Q8TAL5 461 aaPredicted RBP17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 LRRC3BQ96PB8 259 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 SAGE1Q9NXZ1 904 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 DNAJC27Q9NZQ0 273 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 SNX11Q9Y5W9 270 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 PAPLNO95428 1278 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 CISD3P0C7P0 127 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 MAPK12P53778 367 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 EPHA5P54756 1037 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 DESI1Q6ICB0 168 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 DEF8Q6ZN54 512 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 IKBIPQ70UQ0 350 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 BCDIN3DQ7Z5W3 292 aaKnown RBP17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 FAM129CQ86XR2 697 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 REM2Q8IYK8 340 aaPredicted RBP17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 FAM46DQ8NEK8 389 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 APOBEC4Q8WW27 367 aaKnown RBP17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 NXPE3Q969Y0 559 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 SPATA7Q9P0W8 599 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 TAC3Q9UHF0 121 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 KCND3Q9UK17 655 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 UGT2A1Q9Y4X1 527 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 GOLGA4Q13439 2230 aaKnown RBP17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 CKAP5Q14008 2032 aa17.93■□□□□ 0.46
TM9SF1-206ENST00000528669 FEZF1A0PJY2 475 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 SH3D21A4FU49 640 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 A8MU76 341 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 TLR4O00206 839 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 CCRL2O00421 344 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 CTDSP2O14595 271 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 B4GALT2O60909 372 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 GPX5O75715 221 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 MED26O95402 600 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 DDCP20711 480 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 HCAR2Q8TDS4 363 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 UCN3Q969E3 161 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 UBE2E3Q969T4 207 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 ZNF717Q9BY31 904 aaPredicted RBP17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 CUEDC1Q9NWM3 386 aaPredicted RBP17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 CNOT2Q9NZN8 540 aaKnown RBP17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 MARK1Q9P0L2 795 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 REV1Q9UBZ9 1251 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 CLEC2DQ9UHP7 191 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 ENOPH1Q9UHY7 261 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 TMCC3Q9ULS5 477 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 ICKQ9UPZ9 632 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 WDR37Q9Y2I8 494 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 PCDHGB6Q9Y5F9 930 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 PEX16Q9Y5Y5 336 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 GPC6Q9Y625 555 aaPredicted RBP17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 KIF26AQ9ULI4 1882 aaPredicted RBP17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 HAT1O14929 419 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 SNPHO15079 494 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 OR10H3O60404 316 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 SOX3P41225 446 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 SAXO2Q658L1 398 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 TCTN3Q6NUS6 607 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 KRT78Q8N1N4 520 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 ANKRD53Q8N9V6 530 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 OR4D11Q8NGI4 311 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 EXOSC8Q96B26 276 aaKnown RBP17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 TM4SF18Q96CE8 201 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 NEURL3Q96EH8 262 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 UCK2Q9BZX2 261 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 NUAK2Q9H093 628 aa17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 EXOSC4Q9NPD3 245 aaKnown RBP17.92■□□□□ 0.46
TM9SF1-206ENST00000528669 RBMX2Q9Y388 322 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms