RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 RSL1D1O76021 490 aaKnown RBP10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 SCELO95171 688 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 LDLRP01130 860 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 PDGFAP04085 211 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 UMODP07911 640 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 CCNYL3P0C7X3 344 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 ZNF10P21506 573 aaPredicted RBP10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 HIST1H1TP22492 207 aaPredicted RBP10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 HNRNPH2P55795 449 aaKnown RBP10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 SKP1P63208 163 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 ACSM2AQ08AH3 577 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 MRPL49Q13405 166 aaKnown RBP10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 RUNX2Q13950 521 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 NCF4Q15080 339 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 EIF2S3LQ2VIR3 472 aaKnown RBP10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 GALNTL6Q49A17 601 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 ACSM2BQ68CK6 577 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 OR4C11Q6IEV9 310 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 TCTN3Q6NUS6 607 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 RIPOR1Q6ZS17 1223 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 RNF165Q6ZSG1 346 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 ASB18Q6ZVZ8 466 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 MAVSQ7Z434 540 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 TRIM46Q7Z4K8 759 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 NUDT13Q86X67 352 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 CRLF3Q8IUI8 442 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 ZC3H7AQ8IWR0 971 aaKnown RBP10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 CA13Q8N1Q1 262 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 ACOT4Q8N9L9 421 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 FAM47BQ8NA70 645 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 OR51Q1Q8NH59 317 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 PEX11GQ96HA9 241 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 SERINC2Q96SA4 455 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 MAPKAP1Q9BPZ7 522 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 DPH2Q9BQC3 489 aaPredicted RBP10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 SOX17Q9H6I2 414 aaPredicted RBP10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 PSD3Q9NYI0 1048 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 GPN3Q9UHW5 284 aaPredicted RBP10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 MAP4K5Q9Y4K4 846 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 CCL27Q9Y4X3 112 aa10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 TNRC6AQ8NDV7 1962 aaKnown RBP10.88□□□□□ -0.67
CCDC90B-210ENST00000528149 LSM1O15116 133 aaKnown RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 POLR3GO15318 223 aaPredicted RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 CHST10O43529 356 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 RGS14O43566 566 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 PRKRAO75569 313 aaKnown RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 CREG1O75629 220 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 CDC123O75794 336 aaPredicted RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 KLF7O75840 302 aaPredicted RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 KLK1P06870 262 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 RNH1P13489 461 aaKnown RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 PTPN4P29074 926 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 TPP2P29144 1249 aaPredicted RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 TIA1P31483 386 aaKnown RBP eCLIP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 XCR1P46094 333 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 LIM2P55344 173 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 RPL38P63173 70 aaKnown RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 RAE1P78406 368 aaKnown RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 ATP1A4Q13733 1029 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 SPIN4Q56A73 249 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 VWA2Q5GFL6 755 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 VWA5B1Q5TIE3 1220 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 CYP20A1Q6UW02 462 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 Q6ZSR9 355 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 WDR75Q8IWA0 830 aaKnown RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 KIRREL3Q8IZU9 778 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 CDC26Q8NHZ8 85 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 ADAMTS17Q8TE56 1095 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 CHTF18Q8WVB6 975 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 KIAA1143Q96AT1 154 aaPredicted RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 FKBP10Q96AY3 582 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 THOC1Q96FV9 657 aaKnown RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 POM121Q96HA1 1249 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 CSF3RQ99062 836 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 ROGDIQ9GZN7 287 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 LRTM1Q9HBL6 345 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 FGFR1OP2Q9NVK5 253 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 NMRK1Q9NWW6 199 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 FAM53CQ9NYF3 392 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 AHSPQ9NZD4 102 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 ERRFI1Q9UJM3 462 aaPredicted RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 FBXW2Q9UKT8 454 aa10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 FARSAQ9Y285 508 aaKnown RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 POLR3HQ9Y535 204 aaPredicted RBP10.87□□□□□ -0.67
CCDC90B-210ENST00000528149 DOCK10Q96BY6 2186 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 GOLGA8QA0A0J9YX86 632 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 ARHGAP10A1A4S6 786 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 GOLGA8OA6NCC3 632 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 ARGFXA6NJG6 315 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 FAM227AF5H4B4 570 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 GOLGA8NF8WBI6 632 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 MKRN2OSH3BPM6 223 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 SDHDO14521 159 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 HDAC3O15379 428 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 PCDH7O60245 1069 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 EDF1O60869 148 aaKnown RBP10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 SEC22BO75396 215 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 ONECUT2O95948 504 aa10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 PIM1P11309 404 aaPredicted RBP10.86□□□□□ -0.67
CCDC90B-210ENST00000528149 OTX2P32243 289 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms