RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 AGBL3Q8NEM8 1001 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 SH3RF2Q8TEC5 729 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 ZNF431Q8TF32 576 aaPredicted RBP7.19□□□□□ -1.26
SOX6-208ENST00000527619 NUDT8Q8WV74 236 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 NT5C3BQ969T7 300 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 CPNE4Q96A23 557 aaPredicted RBP7.19□□□□□ -1.26
SOX6-208ENST00000527619 KIAA1143Q96AT1 154 aaPredicted RBP7.19□□□□□ -1.26
SOX6-208ENST00000527619 MGLLQ99685 303 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 FSD1LQ9BXM9 530 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 LDAHQ9H6V9 325 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 GLOD4Q9HC38 313 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 PIGVQ9NUD9 493 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 PRMT7Q9NVM4 692 aaPredicted RBP7.19□□□□□ -1.26
SOX6-208ENST00000527619 C1orf109Q9NX04 203 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 RNF181Q9P0P0 153 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 MIOXQ9UGB7 285 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 ZMYM5Q9UJ78 669 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 ING4Q9UNL4 249 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 SAMD4AQ9UPU9 718 aaKnown RBP7.19□□□□□ -1.26
SOX6-208ENST00000527619 BAIAP2Q9UQB8 552 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 TNFSF13BQ9Y275 285 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 CRYL1Q9Y2S2 319 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 NME7Q9Y5B8 376 aa7.19□□□□□ -1.26
SOX6-208ENST00000527619 A0A1B0GVM2 712 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 PIPSLA2A3N6 862 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 KERAO60938 352 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 OR4F21O95013 312 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 NR2C1P13056 603 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 ARSBP15848 533 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 ZNF8P17098 575 aaPredicted RBP7.18□□□□□ -1.26
SOX6-208ENST00000527619 ITGB8P26012 769 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 PTBP1P26599 531 aaKnown RBP eCLIP7.18□□□□□ -1.263e-7■■■■■ 36.1
SOX6-208ENST00000527619 AKT1P31749 480 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 GGT2P36268 569 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 MAP2K6P52564 334 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 NUDT6P53370 316 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 ST3GAL4Q11206 333 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 MED22Q15528 200 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 TCEA2Q15560 299 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 ATG9BQ674R7 924 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 OR4F3Q6IEY1 312 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 ETV3LQ6ZN32 361 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 Q6ZSR9 355 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 USP45Q70EL2 814 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 CALHM3Q86XJ0 350 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 MSRB3Q8IXL7 192 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 FAM217AQ8IXS0 508 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 PHACTR4Q8IZ21 702 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 EDARADDQ8WWZ3 215 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 NDRG1Q92597 394 aaKnown RBP7.18□□□□□ -1.26
SOX6-208ENST00000527619 RBPMSQ93062 196 aaKnown RBP7.18□□□□□ -1.26
SOX6-208ENST00000527619 WNT8BQ93098 351 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 NTAN1Q96AB6 310 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 FAM120BQ96EK7 910 aaKnown RBP7.18□□□□□ -1.26
SOX6-208ENST00000527619 C7orf34Q96L11 122 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 TEPSINQ96N21 525 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 EDEM2Q9BV94 578 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 TTYH1Q9H313 450 aaPredicted RBP7.18□□□□□ -1.26
SOX6-208ENST00000527619 FZD8Q9H461 694 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 EXOSC4Q9NPD3 245 aaKnown RBP7.18□□□□□ -1.26
SOX6-208ENST00000527619 SNTG1Q9NSN8 517 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 RBFOX1Q9NWB1 397 aaKnown RBP7.18□□□□□ -1.26
SOX6-208ENST00000527619 SLC25A37Q9NYZ2 338 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 AKAP7Q9P0M2 348 aaPredicted RBP7.18□□□□□ -1.26
SOX6-208ENST00000527619 ZNF225Q9UK10 706 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 PCDHB10Q9UN67 800 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 GABRQQ9UN88 632 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 POLR3HQ9Y535 204 aaPredicted RBP7.18□□□□□ -1.26
SOX6-208ENST00000527619 FKBP7Q9Y680 259 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 IGKV6D-21A0A0A0MT36 114 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 MASP2O00187 686 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 AGRPO00253 132 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 TCAPO15273 167 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 ORC5O43913 435 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 SLC43A1O75387 559 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 ABLIM3O94929 683 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 ZNF682O95780 498 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 S1PR4O95977 384 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 IFNA7P01567 189 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 FABP3P05413 133 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 GP1BAP07359 652 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 TSPAN19P0C672 248 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 ZP3P21754 424 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 POU1F1P28069 291 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 CDH4P55283 916 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 MAT1AQ00266 395 aaKnown RBP7.18□□□□□ -1.26
SOX6-208ENST00000527619 PUM1Q14671 1186 aaKnown RBP eCLIP7.18□□□□□ -1.26
SOX6-208ENST00000527619 SEC23BQ15437 767 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 SSX1Q16384 188 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 FLYWCH1Q4VC44 716 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 HSD17B12Q53GQ0 312 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 NOMO2Q5JPE7 1267 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 STRIP1Q5VSL9 837 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 DCAF15Q66K64 600 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 GPR153Q6NV75 609 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 GDPGP1Q6ZNW5 385 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 TRMT11Q7Z4G4 463 aaKnown RBP7.18□□□□□ -1.26
SOX6-208ENST00000527619 ZNF605Q86T29 641 aa7.18□□□□□ -1.26
SOX6-208ENST00000527619 LDB1Q86U70 411 aaPredicted RBP7.18□□□□□ -1.26
SOX6-208ENST00000527619 GLCCI1Q86VQ1 547 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms