RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 FMO3P31513 532 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 GRK3P35626 688 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 TRA2BP62995 288 aaKnown RBP13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 MVKQ03426 396 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 OCA2Q04671 838 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 ADAM15Q13444 863 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 UAP1L1Q3KQV9 507 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 SPDYE7PQ495Y7 208 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 TMEM35AQ53FP2 167 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 KIAA1614Q5VZ46 1190 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 SAXO2Q658L1 398 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 GPR153Q6NV75 609 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 DCDC5Q6ZRR9 648 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 PLD3Q8IV08 490 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 OR52E1Q8NGJ3 308 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 OR2A1Q8NGT9 310 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 CHPT1Q8WUD6 406 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 PITX2Q99697 317 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 MYOCQ99972 504 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 MRPS30Q9NP92 439 aaKnown RBP13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 SLAMF7Q9NQ25 335 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 NECTIN3Q9NQS3 549 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 THSD1Q9NS62 852 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 NDUFAF4Q9P032 175 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 HEBP2Q9Y5Z4 205 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 IGKV1-8A0A0C4DH67 115 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 OR52A4PA6NMU1 304 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 E9PQ18 207 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 SLC31A1O15431 190 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 TMPRSS11DO60235 418 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 SH3BP5O60239 455 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 LCMT2O60294 686 aaKnown RBP13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 ADAM23O75077 832 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 COL9A1P20849 921 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 CD6P30203 668 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 SSR2P43308 183 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 MLLT10P55197 1068 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 CSNK2BP67870 215 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 SPIBQ01892 262 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 ZNF846Q147U1 533 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 NR1D2Q14995 579 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 MAD2L1BPQ15013 274 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 SYT6Q5T7P8 510 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 OR4C11Q6IEV9 310 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 FAM180BQ6P0A1 224 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 UBE3DQ7Z6J8 389 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 TBC1D19Q8N5T2 526 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 IL17RCQ8NAC3 791 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 IPCEF1Q8WWN9 437 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 EXOSC8Q96B26 276 aaKnown RBP13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 YIPF6Q96EC8 236 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 ZBED6CLQ96FA7 236 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 OR2M4Q96R27 311 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 DDX31Q9H8H2 851 aaKnown RBP13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 SCML1Q9UN30 329 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 LYVE1Q9Y5Y7 322 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 DGKBQ9Y6T7 804 aa13.09□□□□□ -0.31
LDLRAD3-202ENST00000524419 MYO10Q9HD67 2058 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 C5orf58C9J3I9 102 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 RGS10O43665 173 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 SULT1C4O75897 302 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 EGFP01133 1207 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 TFPTP0C1Z6 253 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 TNFRSF1BP20333 461 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 CTHP32929 405 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 BCL6P41182 706 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 PCBP3P57721 371 aaKnown RBP13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 PPP2CBP62714 309 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 PPP2CAP67775 309 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 ABATP80404 500 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 HSPB3Q12988 150 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 RPE65Q16518 533 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 REEP3Q6NUK4 255 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 CEACAM20Q6UY09 585 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 CREB3L4Q8TEY5 395 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 VMP1Q96GC9 406 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 SCARF2Q96GP6 870 aaPredicted RBP13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 SH3YL1Q96HL8 342 aaPredicted RBP13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 ZNF300Q96RE9 604 aaPredicted RBP13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 GDF15Q99988 308 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 GABARAPL3Q9BY60 117 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 ABCG4Q9H172 646 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 A4GALTQ9NPC4 353 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 PRDM8Q9NQV8 689 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 RAB23Q9ULC3 237 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 ERGIC3Q9Y282 383 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 NCKAP1Q9Y2A7 1128 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 CORINQ9Y5Q5 1042 aa13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 SNRNP200O75643 2136 aaKnown RBP13.08□□□□□ -0.32
LDLRAD3-202ENST00000524419 A0A0A6YYD5 115 aa13.07□□□□□ -0.32
LDLRAD3-202ENST00000524419 A0A1W2PQF6 199 aa13.07□□□□□ -0.32
LDLRAD3-202ENST00000524419 PRSS38A1L453 326 aa13.07□□□□□ -0.32
LDLRAD3-202ENST00000524419 CLDN25C9JDP6 229 aa13.07□□□□□ -0.32
LDLRAD3-202ENST00000524419 J3QRK9 145 aa13.07□□□□□ -0.32
LDLRAD3-202ENST00000524419 OCM2P0CE71 109 aa13.07□□□□□ -0.32
LDLRAD3-202ENST00000524419 OCMP0CE72 109 aaPredicted RBP13.07□□□□□ -0.32
LDLRAD3-202ENST00000524419 FRKP42685 505 aaPredicted RBP13.07□□□□□ -0.32
LDLRAD3-202ENST00000524419 CDH12P55289 794 aa13.07□□□□□ -0.32
LDLRAD3-202ENST00000524419 PCBP4P57723 403 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms