RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 LRRC45Q96CN5 670 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 CDKN2AIPNLQ96HQ2 116 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 VPS50Q96JG6 964 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 SPATA13Q96N96 652 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 OSBPL9Q96SU4 736 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 SLX1AQ9BQ83 275 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 SELENOSQ9BQE4 189 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 WDR54Q9H977 334 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 MRM3Q9HC36 420 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 ABHD10Q9NUJ1 306 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 TBC1D23Q9NUY8 699 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 NLE1Q9NVX2 485 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 TAGLN3Q9UI15 199 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 MID2Q9UJV3 735 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 C3orf18Q9UK00 162 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 SLC39A10Q9ULF5 831 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 TFR2Q9UP52 801 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 REXO2Q9Y3B8 237 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 MDC1Q14676 2089 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 POLQO75417 2590 aa4.98□□□□□ -1.61
CTNNA1-239ENST00000523685 C2CD3Q4AC94 2353 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 NSG1A0A0A6YYJ2 146 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 TRAV17A0A0B4J275 112 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 TRBV5-4A0A0C4DH59 114 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 A0A0J9YVX5 310 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 SLC5A10A0PJK1 596 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 HEATR9A2RTY3 570 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 HYKKA2RU49 373 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 CCDC162PA2VCL2 907 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 KRT87PA6NCN2 255 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 IQCF5A8MTL0 148 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 QSOX1O00391 747 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 PCDH17O14917 1159 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 KRT38O76015 456 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 INMTO95050 263 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 HPP00738 406 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 CELA2AP08217 269 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 ERVK-10P10266 1014 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 CD9P21926 228 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 FBLP22087 321 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 CXCR2P25025 360 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 PSMB5P28074 263 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 MAGEA1P43355 309 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 RAB28P51157 221 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 NAP1L1P55209 391 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 KLC1Q07866 573 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 TSTA3Q13630 321 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 TRIM14Q14142 442 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 VWA2Q5GFL6 755 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 TCTE1Q5JU00 501 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 WASHC2DQ5SRD0 308 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 RBM20Q5T481 1227 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 FCRL6Q6DN72 434 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 FRMPD2BQ6IN97 320 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 AADACL2Q6P093 401 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 CNSTQ6PJW8 725 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 NLRP9Q7RTR0 991 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 VRK3Q8IV63 474 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 KRT222Q8N1A0 295 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 AMER2Q8N7J2 671 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 FAM71DQ8N9W8 422 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 LINC01555Q8NAE3 123 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 STT3BQ8TCJ2 826 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 STYXQ8WUJ0 223 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 ITLN2Q8WWU7 325 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 NR4A3Q92570 626 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 PTCD3Q96EY7 689 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 CABS1Q96KC9 395 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 LURAP1Q96LR2 239 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 TAAR6Q96RI8 345 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 AMBRA1Q9C0C7 1298 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 CHRNA10Q9GZZ6 450 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 ZNF304Q9HCX3 659 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 TBCCD1Q9NVR7 557 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 SEC14L3Q9UDX4 400 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 NXT1Q9UKK6 140 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 SVILO95425 2214 aa4.97□□□□□ -1.61
CTNNA1-239ENST00000523685 CNTRLQ7Z7A1 2325 aa4.96□□□□□ -1.61
CTNNA1-239ENST00000523685 F8P00451 2351 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 LOC105369274A0A096LPK9 316 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 LOC102723532A0A0G2JNH3 316 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 A8MUI8 341 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 H7C0S8 307 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 RAB27BO00194 218 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 PRRG2O14669 202 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 CTSVO60911 334 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 USP1O94782 785 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 RASAL1O95294 804 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 METTL18O95568 372 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 WDPCPO95876 746 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 GOT2P00505 430 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 RPN2P04844 631 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 HEXBP07686 556 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 PRR35P0CG20 571 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 COX6A1P12074 109 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 MST1P26927 711 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 ACVR2AP27037 513 aa4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 PPIFP30405 207 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-239ENST00000523685 CCR7P32248 378 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms