RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 YIPF2Q9BWQ6 316 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 CLK4Q9HAZ1 481 aaKnown RBP20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 NDE1Q9NXR1 346 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 SLAMF8Q9P0V8 285 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 CROTQ9UKG9 612 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 TMEM184BQ9Y519 407 aaPredicted RBP20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 RIF1Q5UIP0 2472 aaKnown RBP20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 ASCC3Q8N3C0 2202 aaKnown RBP20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 CYR61O00622 381 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 SCN2BO60939 215 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 ERAL1O75616 437 aaKnown RBP20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 KCNH1O95259 989 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 FGF5P12034 268 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 RNH1P13489 461 aaKnown RBP20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 DNAL1Q4LDG9 190 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 HES3Q5TGS1 186 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 HACD2Q6Y1H2 254 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 DHDDSQ86SQ9 333 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 DEFB107AQ8IZN7 70 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 CLECL1Q8IZS7 167 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 COL26A1Q96A83 441 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 MIEF2Q96C03 454 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 CLIP3Q96DZ5 547 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 ZNF764Q96H86 408 aaPredicted RBP20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 PEX11GQ96HA9 241 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 DEPDC7Q96QD5 511 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 SLC35C2Q9NQQ7 365 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 FBXO8Q9NRD0 319 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 SLC39A1Q9NY26 324 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 TAS2R7Q9NYW3 318 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 CES1P1Q9UKY3 287 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 PSME2Q9UL46 239 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 LOXL2Q9Y4K0 774 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 A0A1W2PRB8 838 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 RNASET2O00584 256 aaKnown RBP20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 RFXANKO14593 260 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 PDPK1O15530 556 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 NTRK1P04629 796 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 FTH1P19P0C7X4 201 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 CSRP1P21291 193 aaKnown RBP20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 CAPRIN1Q14444 709 aaKnown RBP20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 TRMT5Q32P41 509 aaKnown RBP20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 OR52E8Q6IFG1 317 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 RHBDD2Q6NTF9 364 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 PRMT9Q6P2P2 845 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 DNAJC14Q6Y2X3 702 aaPredicted RBP20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 NATD1Q8N6N6 113 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 OR51Q1Q8NH59 317 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 LRRC58Q96CX6 371 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 PANX1Q96RD7 426 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 SLC39A3Q9BRY0 314 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 RBCK1Q9BYM8 510 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 ZNF304Q9HCX3 659 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 SERHLQ9NQF3 203 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 BTNL2Q9UIR0 455 aa20.16■□□□□ 0.82
R3HCC1-208ENST00000522012 ANP32DO95626 131 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 FBLP22087 321 aaKnown RBP20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 PSME3P61289 254 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 DLEU7Q6UYE1 221 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 RAB11FIP2Q7L804 512 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 PGAM4Q8N0Y7 254 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 TMEM52Q8NDY8 209 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 DNAJB14Q8TBM8 379 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 CCDC115Q96NT0 180 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 BBS4Q96RK4 519 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 GIMAP4Q9NUV9 329 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 PCDHGB4Q9UN71 923 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 MAN2B2Q9Y2E5 1009 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 PCDHB3Q9Y5E6 796 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 ZNF780BQ9Y6R6 833 aa20.15■□□□□ 0.82
R3HCC1-208ENST00000522012 A0A096LPI6 279 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 B4E171 279 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 GSC2O15499 205 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 C6orf47O95873 294 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 NPPAP01160 153 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 GSNP06396 782 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 ABCB1P08183 1280 aaPredicted RBP20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 HBQ1P09105 142 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 C8orf89P0DMQ9 161 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 TSPAN7P41732 249 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 CDKN2CP42773 168 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 TRPC1P48995 793 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 HNRNPFP52597 415 aaKnown RBP20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 LRRC74AQ0VAA2 488 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 ZNF750Q32MQ0 723 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 OR4A15Q8NGL6 344 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 ADAMTS18Q8TE60 1221 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 MCUR1Q96AQ8 359 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 HOPXQ9BPY8 73 aaPredicted RBP20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 CADM1Q9BY67 442 aaKnown RBP20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 ENTPD4Q9Y227 616 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 PCDHGA7Q9Y5G6 932 aa20.14■□□□□ 0.81
R3HCC1-208ENST00000522012 B4GALT2O60909 372 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 ERN1O75460 977 aaKnown RBP20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 DNAJC8O75937 253 aaPredicted RBP20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 ITIH1P19827 911 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 NTSP30990 170 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 FEN1P39748 380 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms