RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 THAP2Q9H0W7 228 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 GANQ9H2C0 597 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 DCLRE1BQ9H816 532 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 RMND5AQ9H871 391 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 COG4Q9H9E3 785 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 ROPN1Q9HAT0 212 aaPredicted RBP3.57□□□□□ -1.84
SQLE-204ENST00000520493 VAT1LQ9HCJ6 419 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 FARSBQ9NSD9 589 aaKnown RBP3.57□□□□□ -1.84
SQLE-204ENST00000520493 INTS9Q9NV88 658 aaKnown RBP3.57□□□□□ -1.84
SQLE-204ENST00000520493 TBC1D13Q9NVG8 400 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 C2orf42Q9NWW7 574 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 NDUFA13Q9P0J0 144 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 VPS54Q9P1Q0 977 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 IL20RAQ9UHF4 553 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 NARFQ9UHQ1 456 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 PSORS1C1Q9UIG5 152 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 MFHAS1Q9Y4C4 1052 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 ANGPTL3Q9Y5C1 460 aa3.57□□□□□ -1.84
SQLE-204ENST00000520493 CCL24O00175 119 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 EEF2KO00418 725 aaKnown RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 CHUKO15111 745 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 ARPC1BO15143 372 aaKnown RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 MAGEB3O15480 346 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 TBX19O60806 448 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 VPS26AO75436 327 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 GMNNO75496 209 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 RHOBTB1O94844 696 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 EML2O95834 649 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 CLPTM1O96005 669 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 EPOP01588 193 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 GSTA2P09210 222 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 CT45A8P0DMV1 189 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 CT45A9P0DMV2 189 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 CALCBP10092 127 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 TNNI3P19429 210 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 HNRNPA2B1P22626 353 aaKnown RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 GLRA2P23416 452 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 CYP2F1P24903 491 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 PBLDP30039 288 aaPredicted RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 PRDX6P30041 224 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 ALDH3B1P43353 468 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 CCR4P51679 360 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 KCNK10P57789 538 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 CDR2Q01850 454 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 SPIBQ01892 262 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 CDH18Q13634 790 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 EXT1Q16394 746 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 NADK2Q4G0N4 442 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 CT45A2Q5DJT8 189 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 PLPP4Q5VZY2 271 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 ZNF772Q68DY9 489 aaPredicted RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 HIST2H2AA3Q6FI13 130 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 TCEAL6Q6IPX3 200 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 ZNF790Q6PG37 636 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 DHRS11Q6UWP2 260 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 RBMS3Q6XE24 437 aaKnown RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 LEKR1Q6ZMV7 388 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 TMEM26Q6ZUK4 368 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 SLC24A5Q71RS6 500 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 TRPT1Q86TN4 253 aaKnown RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 VASH2Q86V25 355 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 MISPQ8IVT2 679 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 CENPLQ8N0S6 344 aaPredicted RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 CCDC185Q8N715 623 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 KLHDC1Q8N7A1 406 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 LRTM2Q8N967 370 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 SMYD1Q8NB12 490 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 SLC37A3Q8NCC5 494 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 ADAD2Q8NCV1 583 aaKnown RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 TRPV3Q8NET8 790 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 OR1L3Q8NH93 324 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 GANCQ8TET4 914 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 CHPT1Q8WUD6 406 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 ZNRF4Q8WWF5 429 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 SEPT8Q92599 483 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 FCGR1BQ92637 280 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 GLYATL1Q969I3 302 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 NKX3-1Q99801 234 aaPredicted RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 CBWD1Q9BRT8 395 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 NUSAP1Q9BXS6 441 aaKnown RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 TRIM6Q9C030 488 aaPredicted RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 RAB33BQ9H082 229 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 EGLN3Q9H6Z9 239 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.56□□□□□ -1.84
SQLE-204ENST00000520493 COPS7AQ9UBW8 275 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 EPHA6Q9UF33 1036 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 SNX6Q9UNH7 406 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 MAB21L2Q9Y586 359 aa3.56□□□□□ -1.84
SQLE-204ENST00000520493 RAD54L2Q9Y4B4 1467 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 A0A1B0GUL7 405 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 TMEM89A2RUT3 159 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 MTMR11A4FU01 709 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 MSGN1A6NI15 193 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 E5RGE8 158 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 AP3B1O00203 1094 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 CCSO14618 274 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 MAPK13O15264 365 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 OGTO15294 1046 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 LANCL1O43813 399 aa3.55□□□□□ -1.84
SQLE-204ENST00000520493 KIF5CO60282 957 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms