RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 C17orf62Q9BQA9 187 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 KLHL31Q9H511 634 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 ADAM29Q9UKF5 820 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 PCDH17O14917 1159 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 BCAS1O75363 584 aaPredicted RBP24.45■■□□□ 1.5
COL13A1-213ENST00000520267 CLEC3AO75596 197 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 ZBTB11O95625 1053 aaPredicted RBP24.45■■□□□ 1.5
COL13A1-213ENST00000520267 BCL10O95999 233 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 ANXA8P13928 327 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 SPCS2Q15005 226 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 TMEM196Q5HYL7 178 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 CCDC81Q6ZN84 652 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 ANKRD13BQ86YJ7 626 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 SLC44A2Q8IWA5 706 aaPredicted RBP24.45■■□□□ 1.5
COL13A1-213ENST00000520267 RORBQ92753 470 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 MACROD1Q9BQ69 325 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 APOOQ9BUR5 198 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 NEUROD4Q9HD90 331 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 A4GALTQ9NPC4 353 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 PRDM8Q9NQV8 689 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 LMCD1Q9NZU5 365 aa24.45■■□□□ 1.5
COL13A1-213ENST00000520267 SNRNP200O75643 2136 aaKnown RBP24.44■■□□□ 1.5
COL13A1-213ENST00000520267 A0A0A6YYD5 115 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 LRIT2A6NDA9 550 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 PDZK1P1A8MUH7 402 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 RGS10O43665 173 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 HOXB3P14651 431 aaPredicted RBP24.44■■□□□ 1.5
COL13A1-213ENST00000520267 ACVR2AP27037 513 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 GGT2P36268 569 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 BCL6P41182 706 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 GANABQ14697 944 aaKnown RBP24.44■■□□□ 1.5
COL13A1-213ENST00000520267 SPDYE7PQ495Y7 208 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 ATAT1Q5SQI0 421 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 ZNF793Q6ZN11 406 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 ZNF605Q86T29 641 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 DNASE1L2Q92874 299 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 TMEM19Q96HH6 336 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 DPH7Q9BTV6 452 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 RSPO3Q9BXY4 272 aaPredicted RBP24.44■■□□□ 1.5
COL13A1-213ENST00000520267 RMI1Q9H9A7 625 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 PCDHGA2Q9Y5H1 932 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 ENPP4Q9Y6X5 453 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 WASHC1A8K0Z3 465 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 LIMS1P48059 325 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 WASH2PQ6VEQ5 465 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 SLC6A20Q9NP91 592 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 RHCGQ9UBD6 479 aa24.44■■□□□ 1.5
COL13A1-213ENST00000520267 C5orf58C9J3I9 102 aa24.43■■□□□ 1.5
COL13A1-213ENST00000520267 FADS2O95864 444 aaKnown RBP24.43■■□□□ 1.5
COL13A1-213ENST00000520267 DNTTP04053 509 aa24.43■■□□□ 1.5
COL13A1-213ENST00000520267 SSR2P43308 183 aa24.43■■□□□ 1.5
COL13A1-213ENST00000520267 ADPRHP54922 357 aa24.43■■□□□ 1.5
COL13A1-213ENST00000520267 FOXD4Q12950 439 aaPredicted RBP24.43■■□□□ 1.5
COL13A1-213ENST00000520267 PUM1Q14671 1186 aaKnown RBP eCLIP24.43■■□□□ 1.5
COL13A1-213ENST00000520267 CTF1Q16619 201 aa24.43■■□□□ 1.5
COL13A1-213ENST00000520267 FAM131CQ96AQ9 280 aa24.43■■□□□ 1.5
COL13A1-213ENST00000520267 ZBED6CLQ96FA7 236 aaPredicted RBP24.43■■□□□ 1.5
COL13A1-213ENST00000520267 MRPS30Q9NP92 439 aaKnown RBP24.43■■□□□ 1.5
COL13A1-213ENST00000520267 POFUT2Q9Y2G5 429 aa24.43■■□□□ 1.5
COL13A1-213ENST00000520267 FAM32AQ9Y421 112 aaKnown RBP24.43■■□□□ 1.5
COL13A1-213ENST00000520267 TBC1D3DA0A087WVF3 549 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 TBC1D3IA0A087WXS9 549 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 TBC1D3EA0A087X179 549 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 TBC1D3KA0A087X1G2 549 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 TBC1D3FA6NER0 549 aaPredicted RBP24.42■■□□□ 1.5
COL13A1-213ENST00000520267 TBC1D3LB9A6J9 549 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 SLC31A1O15431 190 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 TFPTP0C1Z6 253 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 TBC1D3HP0C7X1 549 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 PXNP49023 591 aaPredicted RBP24.42■■□□□ 1.5
COL13A1-213ENST00000520267 MAPK11Q15759 364 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 TBC1D3GQ6DHY5 549 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 TBC1D3CQ6IPX1 549 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 TBC1D3Q8IZP1 549 aaPredicted RBP24.42■■□□□ 1.5
COL13A1-213ENST00000520267 SCHIP1Q9P0W5 487 aaPredicted RBP24.42■■□□□ 1.5
COL13A1-213ENST00000520267 XIRP2A4UGR9 3374 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 C4orf51C9J302 202 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 PRICKLE3O43900 615 aaPredicted RBP24.42■■□□□ 1.5
COL13A1-213ENST00000520267 SH3BP5O60239 455 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 GADD45GO95257 159 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 INHBBP09529 407 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 COL9A1P20849 921 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 NTSR1P30989 418 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 GSTM5P46439 218 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 HMGA2P52926 109 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 ZIC1Q15915 447 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 UAP1L1Q3KQV9 507 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 AHSA2Q719I0 299 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 FAM81AQ8TBF8 368 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 ZNF764Q96H86 408 aaPredicted RBP24.42■■□□□ 1.5
COL13A1-213ENST00000520267 RAB11FIP5Q9BXF6 653 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 SERHL2Q9H4I8 314 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 CCNB1IP1Q9NPC3 277 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 NINQ8N4C6 2090 aa24.42■■□□□ 1.5
COL13A1-213ENST00000520267 HMGN4O00479 90 aa24.41■■□□□ 1.5
COL13A1-213ENST00000520267 HAT1O14929 419 aa24.41■■□□□ 1.5
COL13A1-213ENST00000520267 PRKRAO75569 313 aaKnown RBP24.41■■□□□ 1.5
COL13A1-213ENST00000520267 IFNW1P05000 195 aa24.41■■□□□ 1.5
COL13A1-213ENST00000520267 DDX5P17844 614 aaKnown RBP24.41■■□□□ 1.5
COL13A1-213ENST00000520267 RHCEP18577 417 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms