RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 CCDC22O60826 627 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 DCTN3O75935 186 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 RAB40ALP0C0E4 278 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 LIPCP11150 499 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 DDCP20711 480 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 TACR1P25103 407 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 MRPL19P49406 292 aaKnown RBP13.33□□□□□ -0.28
SDC2-203ENST00000519587 PCBP4P57723 403 aaKnown RBP13.33□□□□□ -0.28
SDC2-203ENST00000519587 C21orf58P58505 322 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 ACTN3Q08043 901 aaPredicted RBP13.33□□□□□ -0.28
SDC2-203ENST00000519587 C2orf80Q0P641 193 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 PTGR1Q14914 329 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 SYT16Q17RD7 645 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 DPY19L1Q2PZI1 675 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 MFSD4BQ5TF39 518 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 MLIPQ5VWP3 458 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 TMEM198Q66K66 360 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 FAM71E1Q6IPT2 247 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 MED25Q71SY5 747 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 ZC3H7AQ8IWR0 971 aaKnown RBP13.33□□□□□ -0.28
SDC2-203ENST00000519587 SAMD14Q8IZD0 417 aaPredicted RBP13.33□□□□□ -0.28
SDC2-203ENST00000519587 IL22RA1Q8N6P7 574 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 CCDC197Q8NCU1 140 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 CLHC1Q8NHS4 586 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 STT3BQ8TCJ2 826 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 TANKQ92844 425 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 MIEF2Q96C03 454 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 TM4SF18Q96CE8 201 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 ZNF764Q96H86 408 aaPredicted RBP13.33□□□□□ -0.28
SDC2-203ENST00000519587 MARK4Q96L34 752 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 RBCK1Q9BYM8 510 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 REEP4Q9H6H4 257 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 RPF2Q9H7B2 306 aaKnown RBP13.33□□□□□ -0.28
SDC2-203ENST00000519587 SDR39U1Q9NRG7 319 aaPredicted RBP13.33□□□□□ -0.28
SDC2-203ENST00000519587 ATAD3AQ9NVI7 634 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 TMEM45AQ9NWC5 275 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 ZIM2Q9NZV7 527 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 BAIAP2L1Q9UHR4 511 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 G3BP2Q9UN86 482 aaKnown RBP13.33□□□□□ -0.28
SDC2-203ENST00000519587 MMACHCQ9Y4U1 282 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 PCDHA9Q9Y5H5 950 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 GPR45Q9Y5Y3 372 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 WDFY3Q8IZQ1 3526 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 CROCCQ5TZA2 2017 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 A0A1W2PR48 441 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 CYR61O00622 381 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 SCAMP2O15127 329 aaKnown RBP13.32□□□□□ -0.28
SDC2-203ENST00000519587 B4GALT2O60909 372 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 BMP10O95393 424 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 ZGLP1P0C6A0 271 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 COX7A2P14406 83 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 CLDN8P56748 225 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 HSD17B7P56937 341 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 RPS15P62841 145 aaKnown RBP13.32□□□□□ -0.28
SDC2-203ENST00000519587 SLC13A2Q13183 592 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 NKG7Q16617 165 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 MINDY4Q4G0A6 757 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 TIPARPQ7Z3E1 657 aaKnown RBP13.32□□□□□ -0.28
SDC2-203ENST00000519587 CLNKQ7Z7G1 428 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 GLB1L3Q8NCI6 653 aaPredicted RBP13.32□□□□□ -0.28
SDC2-203ENST00000519587 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.32□□□□□ -0.28
SDC2-203ENST00000519587 CT55Q8WUE5 264 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 PPCDCQ96CD2 204 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 CSF3RQ99062 836 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 EFHD1Q9BUP0 239 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 GPR87Q9BY21 358 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 ASH1LQ9NR48 2969 aaKnown RBP13.32□□□□□ -0.28
SDC2-203ENST00000519587 PRTFDC1Q9NRG1 225 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 SLC22A11Q9NSA0 550 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 HEY2Q9UBP5 337 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 KCND3Q9UK17 655 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 ENTPD4Q9Y227 616 aa13.32□□□□□ -0.28
SDC2-203ENST00000519587 FLNBO75369 2602 aaKnown RBP13.32□□□□□ -0.28
SDC2-203ENST00000519587 SCN2AQ99250 2005 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 PCDH17O14917 1159 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 SLC22A2O15244 555 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 AKAP10O43572 662 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 SLC22A3O75751 556 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 LRATO95237 230 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 TCN2P20062 427 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 PIK3R1P27986 724 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 NTSP30990 170 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 FOLR3P41439 243 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 DNASE1L3Q13609 305 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 C18orf63Q68DL7 685 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 SLC48A1Q6P1K1 146 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 MRPL14Q6P1L8 145 aaKnown RBP13.31□□□□□ -0.28
SDC2-203ENST00000519587 QSOX2Q6ZRP7 698 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 NATD1Q8N6N6 113 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 ENDOVQ8N8Q3 282 aaKnown RBP13.31□□□□□ -0.28
SDC2-203ENST00000519587 GFM2Q969S9 779 aaKnown RBP13.31□□□□□ -0.28
SDC2-203ENST00000519587 TESCQ96BS2 214 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 KLHL29Q96CT2 875 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 EGLN2Q96KS0 407 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 CRB3Q9BUF7 120 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 CROTQ9UKG9 612 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 MKL2Q9ULH7 1088 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 COPG1Q9Y678 874 aaKnown RBP13.31□□□□□ -0.28
SDC2-203ENST00000519587 ZNF780BQ9Y6R6 833 aa13.31□□□□□ -0.28
SDC2-203ENST00000519587 CAPN7Q9Y6W3 813 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms