RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 LRFN1Q9P244 771 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 PSMC3IPQ9P2W1 217 aaPredicted RBP10.72□□□□□ -0.69
VCAN-212ENST00000515397 MRPS33Q9Y291 106 aaKnown RBP10.72□□□□□ -0.69
VCAN-212ENST00000515397 A0A1W2PR48 441 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 TLDC2A0PJX2 215 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 A1L4Q6 167 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 HRKO00198 91 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 PGRMC2O15173 223 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 NEURL1O76050 574 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 SUPT7LO94864 414 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 OR4F21O95013 312 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 PDYNP01213 254 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 KLK1P06870 262 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 FAM58BPP0C7Q3 252 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 CHN1P15882 459 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 RFC3P40938 356 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 CLCN2P51788 898 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 GPR143P51810 404 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 VSNL1P62760 191 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 CLCQ05315 142 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 ELOAQ14241 798 aaKnown RBP10.71□□□□□ -0.69
VCAN-212ENST00000515397 FRG2Q64ET8 278 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 RPUSD3Q6P087 351 aaKnown RBP10.71□□□□□ -0.69
VCAN-212ENST00000515397 SCIMPQ6UWF3 145 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 GALNTL5Q7Z4T8 443 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.71□□□□□ -0.69
VCAN-212ENST00000515397 ZNF227Q86WZ6 799 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 MMP21Q8N119 569 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 BCORP1Q8N888 145 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 MDS2Q8NDY4 140 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 REPS1Q96D71 796 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 MTBPQ96DY7 904 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 TMEM237Q96Q45 408 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 FRG2BQ96QU4 278 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 CCDC77Q9BR77 488 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 CENPKQ9BS16 269 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 DIDO1Q9BTC0 2240 aaKnown RBP10.71□□□□□ -0.69
VCAN-212ENST00000515397 NTMT1Q9BV86 223 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 RNF32Q9H0A6 362 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 RPF2Q9H7B2 306 aaKnown RBP10.71□□□□□ -0.69
VCAN-212ENST00000515397 ABI3Q9P2A4 366 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 VTI1BQ9UEU0 232 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 ADGRE2Q9UHX3 823 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 ERRFI1Q9UJM3 462 aaPredicted RBP10.71□□□□□ -0.69
VCAN-212ENST00000515397 EMCNQ9ULC0 261 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 ASB4Q9Y574 426 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 CLCA3PQ9Y6N3 262 aa10.71□□□□□ -0.69
VCAN-212ENST00000515397 NBPF19A0A087WUL8 3843 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 A0A0A6YYD5 115 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 TMEM200CA6NKL6 621 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 C17orf105B2RV13 164 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 WWP2O00308 870 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 FOXE1O00358 373 aaPredicted RBP10.7□□□□□ -0.7
VCAN-212ENST00000515397 PROM1O43490 865 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 UGDHO60701 494 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 ITGA10O75578 1167 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 SCELO95171 688 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 DDAH2O95865 285 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 SP1P08047 785 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 KRT15P19012 456 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 TAC1P20366 129 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 SERPINB1P30740 379 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 PTGER1P34995 402 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 PHEXP78562 749 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 FOLH1Q04609 750 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 IFT88Q13099 833 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 RCN2Q14257 317 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 ELAVL1Q15717 326 aaKnown RBP10.7□□□□□ -0.7
VCAN-212ENST00000515397 ZNF750Q32MQ0 723 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 ZNF678Q5SXM1 525 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 ZNF324BQ6AW86 544 aaPredicted RBP10.7□□□□□ -0.7
VCAN-212ENST00000515397 MRM1Q6IN84 353 aaKnown RBP10.7□□□□□ -0.7
VCAN-212ENST00000515397 SLC25A25Q6KCM7 469 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 CYP20A1Q6UW02 462 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 MDGA2Q7Z553 956 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 TMEM132CQ8N3T6 1108 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 CCNYL1Q8N7R7 359 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 CDYL2Q8N8U2 506 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 ST6GALNAC3Q8NDV1 305 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 SELENOMQ8WWX9 145 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 NR4A3Q92570 626 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 SHCBP1LQ9BZQ2 653 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 ELOVL6Q9H5J4 265 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 ADAP2Q9NPF8 381 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 TEX10Q9NXF1 929 aaPredicted RBP10.7□□□□□ -0.7
VCAN-212ENST00000515397 TMCO1Q9UM00 188 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 SLC12A4Q9UP95 1085 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 SPACA6W5XKT8 324 aa10.7□□□□□ -0.7
VCAN-212ENST00000515397 G3V3Y1 287 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 LRRTM2O43300 516 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 ZNF354AO60765 605 aaPredicted RBP10.69□□□□□ -0.7
VCAN-212ENST00000515397 SLC25A12O75746 678 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 OR2J2O76002 312 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 ZFAND5O76080 213 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 UNC5CO95185 931 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 AIFM1O95831 613 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 CD46P15529 392 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 IMPDH1P20839 514 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 ATP5F1P24539 256 aaPredicted RBP10.69□□□□□ -0.7
VCAN-212ENST00000515397 CYB561P49447 251 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms