RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ANKRD42Q8N9B4 389 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 PPP1R14CQ8TAE6 165 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 BRIX1Q8TDN6 353 aaKnown RBP13.07□□□□□ -0.32
USP46-209ENST00000514536 UCN3Q969E3 161 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 ANKRD9Q96BM1 317 aaPredicted RBP13.07□□□□□ -0.32
USP46-209ENST00000514536 TLCD1Q96CP7 247 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 AGAP4Q96P64 663 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 SCN2AQ99250 2005 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 PAIP2Q9BPZ3 127 aaKnown RBP13.07□□□□□ -0.32
USP46-209ENST00000514536 RPF2Q9H7B2 306 aaKnown RBP13.07□□□□□ -0.32
USP46-209ENST00000514536 EML4Q9HC35 981 aaKnown RBP13.07□□□□□ -0.32
USP46-209ENST00000514536 FIS1Q9Y3D6 152 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 PCDHGB7Q9Y5F8 929 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 HELZ2Q9BYK8 2649 aaKnown RBP13.07□□□□□ -0.32
USP46-209ENST00000514536 SERTM1A2A2V5 107 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 BLACEA4D250 179 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 GLOD5A6NK44 160 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 AZIN1O14977 448 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 BIRC5O15392 142 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 IFNA16P05015 189 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 ALPPP05187 535 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 DHRS4L1P0CG22 281 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 ARRB2P32121 409 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 BUD31P41223 144 aaPredicted RBP13.07□□□□□ -0.32
USP46-209ENST00000514536 MAPK12P53778 367 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 SLC26A5P58743 744 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 TNFRSF17Q02223 184 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 STX4Q12846 297 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 EXT1Q16394 746 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 RIPOR1Q6ZS17 1223 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 SIRT6Q8N6T7 355 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 OR6Y1Q8NGX8 325 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 M1APQ8TC57 530 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 PSMF1Q92530 271 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 ARL8AQ96BM9 186 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 APIPQ96GX9 242 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 ZBTB20Q9HC78 741 aaPredicted RBP13.07□□□□□ -0.32
USP46-209ENST00000514536 C5AR2Q9P296 337 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 PTGFRNQ9P2B2 879 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 CFAP46Q8IYW2 2715 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 TMEM120BA0PK00 339 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 PGRMC2O15173 223 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 FGF17O60258 216 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 CHI3L2Q15782 390 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 IMPG1Q17R60 797 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 COLEC12Q5KU26 742 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 SPDYAQ5MJ70 313 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 HHATQ5VTY9 493 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 CES4AQ5XG92 561 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 ATG14Q6ZNE5 492 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 TRIM46Q7Z4K8 759 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 TANKQ92844 425 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 WDR41Q9HAD4 459 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 TEX10Q9NXF1 929 aaPredicted RBP13.06□□□□□ -0.32
USP46-209ENST00000514536 TRAF6Q9Y4K3 522 aa13.06□□□□□ -0.32
USP46-209ENST00000514536 SAGE2PA6NJ88 616 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 A8MUI8 341 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 MYO1DO94832 1006 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 AIFM1O95831 613 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 UQCRHP07919 91 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 FGF4P08620 206 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 NR2F6P10588 404 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 NEFHP12036 1026 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 TNNI3P19429 210 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 SERPINB5P36952 375 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 AP2B1P63010 937 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 FOLH1Q04609 750 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 ACSM2AQ08AH3 577 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 SERTAD2Q14140 314 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 AGBL2Q5U5Z8 902 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 B3GNTL1Q67FW5 361 aaPredicted RBP13.05□□□□□ -0.32
USP46-209ENST00000514536 ACSM2BQ68CK6 577 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 JMJD6Q6NYC1 403 aaPredicted RBP13.05□□□□□ -0.32
USP46-209ENST00000514536 ISLR2Q6UXK2 745 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 LINC00696Q6ZRV3 163 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 CLYBLQ8N0X4 340 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 TEX19Q8NA77 164 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 NFAM1Q8NET5 270 aaPredicted RBP13.05□□□□□ -0.32
USP46-209ENST00000514536 AGR3Q8TD06 166 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 TM4SF18Q96CE8 201 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 MFRPQ9BY79 579 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 KCNK13Q9HB14 408 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 MMP25Q9NPA2 562 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 ADAP2Q9NPF8 381 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 VTI1BQ9UEU0 232 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 DNAJC15Q9Y5T4 150 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 PTGDR2Q9Y5Y4 395 aa13.05□□□□□ -0.32
USP46-209ENST00000514536 TMEM233B4DJY2 109 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 SLC28A1O00337 649 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 ITM2AO43736 263 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 DPM1O60762 260 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 GUCY1B2O75343 617 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 LYPLA1O75608 230 aaPredicted RBP13.04□□□□□ -0.32
USP46-209ENST00000514536 ZIC2O95409 532 aaPredicted RBP13.04□□□□□ -0.32
USP46-209ENST00000514536 GPR75O95800 540 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 CHEK2O96017 543 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 SERPINE1P05121 402 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 LINC00032P0C843 101 aa13.04□□□□□ -0.32
USP46-209ENST00000514536 WDR4P57081 412 aaKnown RBP13.04□□□□□ -0.32
USP46-209ENST00000514536 RAE1P78406 368 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms