RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ELAVL1Q15717 326 aaKnown RBP12.38□□□□□ -0.43
RNF4-215ENST00000511843 TTC19Q6DKK2 380 aaPredicted RBP12.38□□□□□ -0.43
RNF4-215ENST00000511843 METTL2BQ6P1Q9 378 aaKnown RBP12.38□□□□□ -0.43
RNF4-215ENST00000511843 DGAT2L6Q6ZPD8 337 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 GALNTL5Q7Z4T8 443 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 MILR1Q7Z6M3 343 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 GPR180Q86V85 440 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 ZNF227Q86WZ6 799 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 TRPC4APQ8TEL6 797 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 SSC4DQ8WTU2 575 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 MZB1Q8WU39 189 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 PTPMT1Q8WUK0 201 aaPredicted RBP12.38□□□□□ -0.43
RNF4-215ENST00000511843 PPWD1Q96BP3 646 aaKnown RBP12.38□□□□□ -0.43
RNF4-215ENST00000511843 MTBPQ96DY7 904 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 VMP1Q96GC9 406 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 SCMH1Q96GD3 660 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 PSMG3-AS1Q96PY0 264 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 TMEM237Q96Q45 408 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 HBEGFQ99075 208 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 CENPKQ9BS16 269 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 NTMT1Q9BV86 223 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 MRPL1Q9BYD6 325 aaKnown RBP12.38□□□□□ -0.43
RNF4-215ENST00000511843 OR8D2Q9GZM6 311 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 TMCO1Q9UM00 188 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 TSC22D4Q9Y3Q8 395 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 CLCA3PQ9Y6N3 262 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 SPACA6W5XKT8 324 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 GTF3C1Q12789 2109 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 MYO7BQ6PIF6 2116 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 A0A0A6YYD5 115 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 IQANK1A0A1B0GTG1 560 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 A0A1W2PR48 441 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 A0A1W2PS29 197 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 TMEM200CA6NKL6 621 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 C17orf105B2RV13 164 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 ITGA10O75578 1167 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 OR4F21O95013 312 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 DDAH2O95865 285 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 SP1P08047 785 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 TNNI3P19429 210 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 TNFRSF17Q02223 184 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 FOLH1Q04609 750 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 RCN2Q14257 317 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 TERF2Q15554 542 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 INAQ16352 499 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 MAPKAPK3Q16644 382 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 UNC50Q53HI1 259 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 TCHHL1Q5QJ38 904 aaPredicted RBP12.37□□□□□ -0.43
RNF4-215ENST00000511843 FRG2Q64ET8 278 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 LGI4Q8N135 537 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 EPS8L3Q8TE67 593 aaKnown RBP12.37□□□□□ -0.43
RNF4-215ENST00000511843 C5orf34Q96MH7 638 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 FRG2BQ96QU4 278 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 C12orf65Q9H3J6 166 aaKnown RBP12.37□□□□□ -0.43
RNF4-215ENST00000511843 RPF2Q9H7B2 306 aaKnown RBP12.37□□□□□ -0.43
RNF4-215ENST00000511843 ANKZF1Q9H8Y5 726 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 VTI1BQ9UEU0 232 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 ZNF225Q9UK10 706 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 PPIEQ9UNP9 301 aaKnown RBP12.37□□□□□ -0.43
RNF4-215ENST00000511843 ASB4Q9Y574 426 aa12.37□□□□□ -0.43
RNF4-215ENST00000511843 USP9YO00507 2555 aaPredicted RBP12.37□□□□□ -0.43
RNF4-215ENST00000511843 POLEQ07864 2286 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 EXPH5Q8NEV8 1989 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 HRKO00198 91 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 WWP2O00308 870 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 FOXE1O00358 373 aaPredicted RBP12.36□□□□□ -0.43
RNF4-215ENST00000511843 FCHO1O14526 889 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 ZNHIT1O43257 154 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 PROM1O43490 865 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 SLC25A12O75746 678 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 SUPT7LO94864 414 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 UNC5CO95185 931 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 AIFM1O95831 613 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 PDYNP01213 254 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 FAM58BPP0C7Q3 252 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 CD46P15529 392 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 RFC3P40938 356 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 CYB561P49447 251 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 HLCSP50747 726 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 HERVK_113P63132 956 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 CLCQ05315 142 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 IFT88Q13099 833 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 CUL3Q13618 768 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 MRM1Q6IN84 353 aaKnown RBP12.36□□□□□ -0.43
RNF4-215ENST00000511843 SLC25A25Q6KCM7 469 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 CYP20A1Q6UW02 462 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 GFRALQ6UXV0 394 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.36□□□□□ -0.43
RNF4-215ENST00000511843 TMEM132CQ8N3T6 1108 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 ZCCHC7Q8N3Z6 543 aaKnown RBP12.36□□□□□ -0.43
RNF4-215ENST00000511843 SLC2A12Q8TD20 617 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 SERPINI1Q99574 410 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 CCDC77Q9BR77 488 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 ERVK-6Q9BXR3 956 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 DDX31Q9H8H2 851 aaKnown RBP12.36□□□□□ -0.43
RNF4-215ENST00000511843 TEX10Q9NXF1 929 aaPredicted RBP12.36□□□□□ -0.43
RNF4-215ENST00000511843 PHF11Q9UIL8 331 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 EMCNQ9ULC0 261 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 NCKAP5O14513 1909 aa12.36□□□□□ -0.43
RNF4-215ENST00000511843 PGRMC2O15173 223 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms