RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 HMOX2P30519 316 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 TSFMP43897 325 aaKnown RBP13.06□□□□□ -0.32
DDX41-212ENST00000511040 KRT6CP48668 564 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 FOXK1P85037 733 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 TNFRSF17Q02223 184 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 ZNF169Q14929 603 aaPredicted RBP13.06□□□□□ -0.32
DDX41-212ENST00000511040 ACER2Q5QJU3 275 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 MRM1Q6IN84 353 aaKnown RBP13.06□□□□□ -0.32
DDX41-212ENST00000511040 NUDT13Q86X67 352 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 MYRIPQ8NFW9 859 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 RDH11Q8TC12 318 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 METTL6Q8TCB7 284 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 DOK4Q8TEW6 326 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 AGAP11Q8TF27 550 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 FAM111AQ96PZ2 611 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 TMEM109Q9BVC6 243 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 SLC29A3Q9BZD2 475 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.06□□□□□ -0.32
DDX41-212ENST00000511040 RPF2Q9H7B2 306 aaKnown RBP13.06□□□□□ -0.32
DDX41-212ENST00000511040 ADAP2Q9NPF8 381 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 OXSMQ9NWU1 459 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 LYARQ9NX58 379 aaKnown RBP13.06□□□□□ -0.32
DDX41-212ENST00000511040 ANKRD10Q9NXR5 420 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 PPT2Q9UMR5 302 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 PCDHGA10Q9Y5H3 936 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 CPAMD8Q8IZJ3 1885 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 CNTRLQ7Z7A1 2325 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 TRBV11-1A0A0K0K1C0 115 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 PROM1O43490 865 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 WISP1O95388 367 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 ESRRBO95718 433 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 AIFM1O95831 613 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 ENO1P06733 434 aaKnown RBP13.05□□□□□ -0.32
DDX41-212ENST00000511040 NR2F6P10588 404 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 TNNI3P19429 210 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 TLX1P31314 330 aaPredicted RBP13.05□□□□□ -0.32
DDX41-212ENST00000511040 ARFIP1P53367 373 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 FOXA1P55317 472 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 PKNOX1P55347 436 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 TAS2R50P59544 299 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 DNAJB13P59910 316 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 PCLAFQ15004 111 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 TLR1Q15399 786 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 CCNYL2Q5T2Q4 361 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 C10orf62Q5T681 223 aaPredicted RBP13.05□□□□□ -0.32
DDX41-212ENST00000511040 H3F3CQ6NXT2 135 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 FRMD7Q6ZUT3 714 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 COMMD6Q7Z4G1 85 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 METTL4Q8N3J2 472 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 SLC5A8Q8N695 610 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 B3GNT7Q8NFL0 401 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 OR1N1Q8NGS0 311 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 ELP5Q8TE02 316 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 THAP3Q8WTV1 239 aaPredicted RBP13.05□□□□□ -0.32
DDX41-212ENST00000511040 NCLNQ969V3 563 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 MIB2Q96AX9 1013 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 ZNF354BQ96LW1 612 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 SMC6Q96SB8 1091 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 CENPHQ9H3R5 247 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 CDCP1Q9H5V8 836 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 TNFRSF12AQ9NP84 129 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 MKS1Q9NXB0 559 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 TEX10Q9NXF1 929 aaPredicted RBP13.05□□□□□ -0.32
DDX41-212ENST00000511040 MS4A12Q9NXJ0 267 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 AHSPQ9NZD4 102 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 TEKT2Q9UIF3 430 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 STK38LQ9Y2H1 464 aa13.05□□□□□ -0.32
DDX41-212ENST00000511040 BLACEA4D250 179 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 RGS16O15492 202 aaPredicted RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 ULK1O75385 1050 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 CRCPO75575 148 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 ZIC2O95409 532 aaPredicted RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 TUBBP07437 444 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 TPP2P29144 1249 aaPredicted RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 SERPINB3P29508 390 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 ALDH3A1P30838 453 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 BUD31P41223 144 aaPredicted RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 TNFSF10P50591 281 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 HMGCS1Q01581 520 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 FOLH1Q04609 750 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 GALNT1Q10472 559 aaPredicted RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 TBL3Q12788 808 aaKnown RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 SERTAD2Q14140 314 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 ELAVL1Q15717 326 aaKnown RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 MEP1AQ16819 746 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 CEP85LQ5SZL2 805 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 LIPMQ5VYY2 423 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 IQCKQ8N0W5 287 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 MMP21Q8N119 569 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 C1orf52Q8N6N3 182 aaKnown RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 ZNF321PQ8N8H1 164 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 APCDD1LQ8NCL9 501 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 TCP10LQ8TDR4 215 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 PTPMT1Q8WUK0 201 aaPredicted RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 HAS2Q92819 552 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 TANKQ92844 425 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 PPWD1Q96BP3 646 aaKnown RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 SNRNP40Q96DI7 357 aaKnown RBP13.04□□□□□ -0.32
DDX41-212ENST00000511040 ZIM3Q96PE6 472 aa13.04□□□□□ -0.32
DDX41-212ENST00000511040 MECRQ9BV79 373 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms