RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 POMZP3Q6PJE2 187 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 RTL4Q6ZR62 310 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 TMEM200AQ86VY9 491 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 C9orf40Q8IXQ3 194 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 FAM109AQ8N4B1 249 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 FBXO36Q8NEA4 188 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 OR10Q1Q8NGQ4 319 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 ZNF473Q8WTR7 871 aaKnown RBP14.69□□□□□ -0.06
RAB40C-202ENST00000509637 PPWD1Q96BP3 646 aaKnown RBP14.69□□□□□ -0.06
RAB40C-202ENST00000509637 VPS39Q96JC1 886 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 NAP1L3Q99457 506 aaPredicted RBP14.69□□□□□ -0.06
RAB40C-202ENST00000509637 FAM173AQ9BQD7 235 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 CCDC77Q9BR77 488 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 MS4A8Q9BY19 250 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 CCM2LQ9NUG4 571 aaPredicted RBP14.69□□□□□ -0.06
RAB40C-202ENST00000509637 DNAJC11Q9NVH1 559 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 PTBP2Q9UKA9 531 aaKnown RBP14.69□□□□□ -0.06
RAB40C-202ENST00000509637 CLCA3PQ9Y6N3 262 aa14.69□□□□□ -0.06
RAB40C-202ENST00000509637 MED12Q93074 2177 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 PABPN1LA6NDY0 278 aaKnown RBP14.68□□□□□ -0.06
RAB40C-202ENST00000509637 ANKDD1BA6NHY2 528 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 E7ESA3 106 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 AQP7O14520 342 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 LRATO95237 230 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 CD1DP15813 335 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 ZFP36L2P47974 494 aaKnown RBP14.68□□□□□ -0.06
RAB40C-202ENST00000509637 DLG1Q12959 904 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 E2F2Q14209 437 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 ACAD11Q709F0 780 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 SLC22A16Q86VW1 577 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 KLHL7Q8IXQ5 586 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 PDIK1LQ8N165 341 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 ACOT4Q8N9L9 421 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 RELL2Q8NC24 303 aaPredicted RBP14.68□□□□□ -0.06
RAB40C-202ENST00000509637 NAXEQ8NCW5 288 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 SENP5Q96HI0 755 aaPredicted RBP14.68□□□□□ -0.06
RAB40C-202ENST00000509637 DERL2Q9GZP9 239 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 RHOJQ9H4E5 214 aa14.68□□□□□ -0.06
RAB40C-202ENST00000509637 GSX1Q9H4S2 264 aaPredicted RBP14.68□□□□□ -0.06
RAB40C-202ENST00000509637 A0A1W2PS29 197 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 OR14I1A6ND48 311 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 FOXO6A8MYZ6 492 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 SAP18O00422 153 aaKnown RBP14.67□□□□□ -0.06
RAB40C-202ENST00000509637 SEC31AO94979 1220 aaKnown RBP14.67□□□□□ -0.06
RAB40C-202ENST00000509637 TGFB1P01137 390 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 CLPSP04118 112 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 CD1EP15812 388 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 PDIA2Q13087 525 aaKnown RBP14.67□□□□□ -0.06
RAB40C-202ENST00000509637 CBLBQ13191 982 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 MYBPHQ13203 477 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 SLC10A1Q14973 349 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 NDUFAF5Q5TEU4 345 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 C18orf63Q68DL7 685 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 TRIM40Q6P9F5 258 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 B3GNT6Q6ZMB0 384 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 RGS9BPQ6ZS82 235 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 CAPN12Q6ZSI9 719 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 FAM47EQ6ZV65 393 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 ADAMTSL2Q86TH1 951 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 CREG2Q8IUH2 290 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 ZZZ3Q8IYH5 903 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 KRT78Q8N1N4 520 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 GOLM1Q8NBJ4 401 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 TTLQ8NG68 377 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 OR8K3Q8NH51 312 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 OR14A16Q8NHC5 309 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 DAZLQ92904 295 aaKnown RBP14.67□□□□□ -0.06
RAB40C-202ENST00000509637 LRRC39Q96DD0 335 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 GPATCH1Q9BRR8 931 aaKnown RBP14.67□□□□□ -0.06
RAB40C-202ENST00000509637 TRIM31Q9BZY9 425 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 SLC6A15Q9H2J7 730 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 EHD1Q9H4M9 534 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 LYRM4Q9HD34 91 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 SACM1LQ9NTJ5 587 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 GPRC5BQ9NZH0 403 aa14.67□□□□□ -0.06
RAB40C-202ENST00000509637 HRNRQ86YZ3 2850 aaPredicted RBP14.66□□□□□ -0.06
RAB40C-202ENST00000509637 CES2O00748 559 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 BCKDKO14874 412 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 SUSD5O60279 629 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 SCELO95171 688 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 CCDC166P0CW27 439 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 TNNI3P19429 210 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 SSTR1P30872 391 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 RPL21P46778 160 aaKnown RBP14.66□□□□□ -0.06
RAB40C-202ENST00000509637 CHIT1Q13231 466 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 C1orf185Q5T7R7 199 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 PRAMEF20Q5VT98 475 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 CES4AQ5XG92 561 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 PAOXQ6QHF9 649 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 ARSKQ6UWY0 536 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 TMEM64Q6YI46 380 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 GK5Q6ZS86 529 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 GPSM1Q86YR5 675 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 SNX31Q8N9S9 440 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 GABPB2Q8TAK5 448 aaPredicted RBP14.66□□□□□ -0.06
RAB40C-202ENST00000509637 PTCD3Q96EY7 689 aaKnown RBP14.66□□□□□ -0.06
RAB40C-202ENST00000509637 UBXN10Q96LJ8 280 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 OR51B5Q9H339 312 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 DLL4Q9NR61 685 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 DNAJB12Q9NXW2 375 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms