RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TOR1BO14657 336 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 MPZL2O60487 215 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 RNGTTO60942 597 aaKnown RBP10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 RPLP0P05388 317 aaKnown RBP10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 CDK1P06493 297 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 TBC1D3HP0C7X1 549 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 LAMP1P11279 417 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 SERPINB1P30740 379 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 IGFALSP35858 605 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 CTSKP43235 329 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 CLCNKAP51800 687 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 NCS1P62166 190 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 TFF2Q03403 129 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 E2F2Q14209 437 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 SLBPQ14493 270 aaKnown RBP eCLIP10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 TBC1D3GQ6DHY5 549 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 LAIR1Q6GTX8 287 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 TBC1D3CQ6IPX1 549 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 SLC30A8Q8IWU4 369 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 TBC1D3Q8IZP1 549 aaPredicted RBP10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 ZNF740Q8NDX6 193 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 TPD52L3Q96J77 140 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 SLC17A9Q9BYT1 436 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 NXF2Q9GZY0 626 aaKnown RBP10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 THSD1Q9NS62 852 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 CCDC59Q9P031 241 aaKnown RBP10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 RNF6Q9Y252 685 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 GPC6Q9Y625 555 aaPredicted RBP10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 PMF1-BGLAPU3KQ54 211 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 A0A0C4DFX4 3053 aa10.51□□□□□ -0.73
SH3RF1-203ENST00000508685 COL4A2P08572 1712 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 SPEGQ15772 3267 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 PNMA8CA0A1B0GUJ8 204 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 PIPSLA2A3N6 862 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 METTL15A6NJ78 407 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 GABRR3A8MPY1 467 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 C2CD4DB7Z1M9 353 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 KMOO15229 486 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 SLC31A1O15431 190 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 AQP9O43315 295 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 COQ9O75208 318 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 UPK1BO75841 260 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 ANXA4P09525 319 aaPredicted RBP10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 S100A5P33763 92 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 ALDH9A1P49189 494 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 RPS13P62277 151 aaKnown RBP10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 LSM3P62310 102 aaKnown RBP10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 PRKCDQ05655 676 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 RPA4Q13156 261 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 IFI44LQ53G44 452 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 TMEM31Q5JXX7 168 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 MED27Q6P2C8 311 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 CCDC80Q76M96 950 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 BTLAQ7Z6A9 289 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 ZNF605Q86T29 641 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 DCUN1D3Q8IWE4 304 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 CADM3Q8N126 398 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 DNAJC22Q8N4W6 341 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 C1orf52Q8N6N3 182 aaKnown RBP10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 SCAIQ8N9R8 606 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 OR5K2Q8NHB8 316 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 APH1BQ8WW43 257 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 SLC5A11Q8WWX8 675 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 FAM131CQ96AQ9 280 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 RAD51AP1Q96B01 352 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 NECTIN4Q96NY8 510 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 ZNF556Q9HAH1 456 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 KCNK12Q9HB15 430 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 RASSF1Q9NS23 344 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 ATP6V1HQ9UI12 483 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 KCNK6Q9Y257 313 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 DYRK1BQ9Y463 629 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 PLEKHM1Q9Y4G2 1056 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 KLK4Q9Y5K2 254 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 PEX16Q9Y5Y5 336 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 PCM1Q15154 2024 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 MUC3AQ02505 3323 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 MN1Q10571 1320 aaPredicted RBP10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 SH3D21A4FU49 640 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 SAP18O00422 153 aaKnown RBP10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 MAN1A2O60476 641 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 DIRAS1O95057 198 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 SNX4O95219 450 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 C1QCP02747 245 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 GBAP04062 536 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 CEACAM5P06731 702 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 SLC35G4P0C7Q5 338 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 CD72P21854 359 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 IDSP22304 550 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 PSMB5P28074 263 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 RRM2P31350 389 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 RAE1P78406 368 aaKnown RBP10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 IFITM3Q01628 133 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 LAPTM4AQ15012 233 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 TCEA2Q15560 299 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 SMN1Q16637 294 aaKnown RBP10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 TIGD6Q17RP2 521 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 MICAQ29983 383 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 TIMM50Q3ZCQ8 353 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 LEXMQ3ZCV2 418 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms