RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 NEK2P51955 445 aa18.56■□□□□ 0.56
SFXN1-209ENST00000508290 PKNOX1P55347 436 aa18.56■□□□□ 0.56
SFXN1-209ENST00000508290 MLF1P58340 268 aa18.56■□□□□ 0.56
SFXN1-209ENST00000508290 IGLV3-21P80748 117 aaPredicted RBP18.56■□□□□ 0.56
SFXN1-209ENST00000508290 PLIN5Q00G26 463 aa18.56■□□□□ 0.56
SFXN1-209ENST00000508290 LCP2Q13094 533 aa18.56■□□□□ 0.56
SFXN1-209ENST00000508290 TUBA3CQ13748 450 aa18.56■□□□□ 0.56
SFXN1-209ENST00000508290 UBAP2LQ14157 1087 aaKnown RBP18.56■□□□□ 0.56
SFXN1-209ENST00000508290 FHL5Q5TD97 284 aa18.56■□□□□ 0.56
SFXN1-209ENST00000508290 MRM1Q6IN84 353 aaKnown RBP18.56■□□□□ 0.56
SFXN1-209ENST00000508290 TUBA3EQ6PEY2 450 aa18.56■□□□□ 0.56
SFXN1-209ENST00000508290 OR8K3Q8NH51 312 aa18.56■□□□□ 0.56
SFXN1-209ENST00000508290 C19orf60Q96EN9 201 aa18.56■□□□□ 0.56
SFXN1-209ENST00000508290 ART5Q96L15 291 aa18.56■□□□□ 0.56
SFXN1-209ENST00000508290 C5orf34Q96MH7 638 aa18.56■□□□□ 0.56
SFXN1-209ENST00000508290 ZNF717Q9BY31 904 aaPredicted RBP18.56■□□□□ 0.56
SFXN1-209ENST00000508290 TRIM45Q9H8W5 580 aaPredicted RBP18.56■□□□□ 0.56
SFXN1-209ENST00000508290 NBASA2RRP1 2371 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 CPAMD8Q8IZJ3 1885 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 TRBV11-1A0A0K0K1C0 115 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 ARHGAP10A1A4S6 786 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 PROM1O43490 865 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 CBX6O95503 412 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 ENO1P06733 434 aaKnown RBP18.55■□□□□ 0.56
SFXN1-209ENST00000508290 TUBBP07437 444 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 FAM58BPP0C7Q3 252 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 NR2F6P10588 404 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 MYL2P10916 166 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 STT3AP46977 705 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 CYB561P49447 251 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 GPR143P51810 404 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 CDH13P55290 713 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 VSNL1P62760 191 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 OC90Q02509 493 aaPredicted RBP18.55■□□□□ 0.56
SFXN1-209ENST00000508290 OR1C1Q15619 314 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 ZNF766Q5HY98 468 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 SH2D5Q6ZV89 423 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 GPRIN3Q6ZVF9 776 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 CLNKQ7Z7G1 428 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 GPALPP1Q8IXQ4 340 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 GBP7Q8N8V2 638 aaPredicted RBP18.55■□□□□ 0.56
SFXN1-209ENST00000508290 FAM98AQ8NCA5 519 aaKnown RBP18.55■□□□□ 0.56
SFXN1-209ENST00000508290 MDS2Q8NDY4 140 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 TRPC4APQ8TEL6 797 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 SELENOMQ8WWX9 145 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 RBM18Q96H35 190 aaKnown RBP18.55■□□□□ 0.56
SFXN1-209ENST00000508290 TMEM237Q96Q45 408 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 SLX1AQ9BQ83 275 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 CDCP1Q9H5V8 836 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 OLAHQ9NV23 265 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.55■□□□□ 0.56
SFXN1-209ENST00000508290 COPS7AQ9UBW8 275 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 NTNG1Q9Y2I2 539 aa18.55■□□□□ 0.56
SFXN1-209ENST00000508290 SPENQ96T58 3664 aaKnown RBP18.55■□□□□ 0.56
SFXN1-209ENST00000508290 ANKUB1A6NFN9 424 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 A8MUA0 341 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 ESPNB1AK53 854 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 TGFBR3LH3BV60 316 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 TNNI3P19429 210 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 GALNSP34059 522 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 CD96P40200 585 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 SLCO1A2P46721 670 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 HLCSP50747 726 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 CSTF3Q12996 717 aaKnown RBP18.54■□□□□ 0.56
SFXN1-209ENST00000508290 NR6A1Q15406 480 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 UNC50Q53HI1 259 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 FCRLBQ6BAA4 426 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 LETMD1Q6P1Q0 360 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 ZYG11AQ6WRX3 759 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 HSDL2Q6YN16 418 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 RNF175Q8N4F7 328 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 KIF2BQ8N4N8 673 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 OR5L2Q8NGL0 311 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 CAVIN3Q969G5 261 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 NCLNQ969V3 563 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 DGAT2Q96PD7 388 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 NPAS2Q99743 824 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 ROPN1BQ9BZX4 212 aaPredicted RBP18.54■□□□□ 0.56
SFXN1-209ENST00000508290 ROPN1Q9HAT0 212 aaPredicted RBP18.54■□□□□ 0.56
SFXN1-209ENST00000508290 LRFN1Q9P244 771 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 ATG4BQ9Y4P1 393 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 ASB4Q9Y574 426 aa18.54■□□□□ 0.56
SFXN1-209ENST00000508290 FLNCQ14315 2725 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 A0A1W2PPM1 405 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 COPEO14579 308 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 LDB3O75112 727 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 ETHE1O95571 254 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 TPP2P29144 1249 aaPredicted RBP18.53■□□□□ 0.56
SFXN1-209ENST00000508290 UQCRFS1P47985 274 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 IFFO1Q0D2I5 559 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 OR52E8Q6IFG1 317 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 ST13P4Q8IZP2 240 aaPredicted RBP18.53■□□□□ 0.56
SFXN1-209ENST00000508290 METTL4Q8N3J2 472 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 AENQ8WTP8 325 aaKnown RBP18.53■□□□□ 0.56
SFXN1-209ENST00000508290 PTPMT1Q8WUK0 201 aaPredicted RBP18.53■□□□□ 0.56
SFXN1-209ENST00000508290 NR4A3Q92570 626 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 TMEM125Q96AQ2 219 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 ANKRD9Q96BM1 317 aaPredicted RBP18.53■□□□□ 0.56
SFXN1-209ENST00000508290 SCMH1Q96GD3 660 aa18.53■□□□□ 0.56
SFXN1-209ENST00000508290 SORBS1Q9BX66 1292 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms