RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 JUNDP17535 347 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 MANFP55145 182 aaKnown RBP13.8□□□□□ -0.2
DDX41-208ENST00000507955 ERVK-21P61565 698 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 OCA2Q04671 838 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 EEF1A2Q05639 463 aaKnown RBP13.8□□□□□ -0.2
DDX41-208ENST00000507955 FCHO2Q0JRZ9 810 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 MAD2L1BPQ15013 274 aaPredicted RBP13.8□□□□□ -0.2
DDX41-208ENST00000507955 TMEM31Q5JXX7 168 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 FAHD1Q6P587 224 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 CEACAM20Q6UY09 585 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 AHSA2Q719I0 299 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 ENTHD1Q8IYW4 607 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 C17orf62Q9BQA9 187 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 MS4A8Q9BY19 250 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 MROQ9BYG7 248 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 CA5BQ9Y2D0 317 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 PCDHGA6Q9Y5G7 932 aa13.8□□□□□ -0.2
DDX41-208ENST00000507955 SLC31A1O15431 190 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 NARSO43776 548 aaKnown RBP13.79□□□□□ -0.2
DDX41-208ENST00000507955 NADKO95544 446 aaPredicted RBP13.79□□□□□ -0.2
DDX41-208ENST00000507955 RECKO95980 971 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 PPIBP23284 216 aaKnown RBP13.79□□□□□ -0.2
DDX41-208ENST00000507955 NUDT6P53370 316 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 TEAD4Q15561 434 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 ZNF750Q32MQ0 723 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 UAP1L1Q3KQV9 507 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 SYCE2Q6PIF2 218 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 DGLUCYQ7Z3D6 616 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 UBE3DQ7Z6J8 389 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 GTPBP3Q969Y2 492 aaKnown RBP13.79□□□□□ -0.2
DDX41-208ENST00000507955 TBC1D20Q96BZ9 403 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 GDE1Q9NZC3 331 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 CORO2BQ9UQ03 480 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 PADI2Q9Y2J8 665 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 PCDHGB3Q9Y5G1 929 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 A0A1W2PS29 197 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 C4orf51C9J302 202 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 FAM20BO75063 409 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 DNAJB5O75953 348 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 BCHEP06276 602 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 PSMB9P28065 219 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 C21orf33P30042 268 aaPredicted RBP13.79□□□□□ -0.2
DDX41-208ENST00000507955 IDH2P48735 452 aaKnown RBP13.79□□□□□ -0.2
DDX41-208ENST00000507955 LRRC74AQ0VAA2 488 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 FAM46CQ5VWP2 391 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 DYNC2LI1Q8TCX1 351 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 DNASE1L2Q92874 299 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 CXorf40BQ96DE9 158 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 VMP1Q96GC9 406 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 TEFMQ96QE5 360 aaKnown RBP13.79□□□□□ -0.2
DDX41-208ENST00000507955 AIF1LQ9BQI0 150 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 HMG20AQ9NP66 347 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 FBXL12Q9NXK8 326 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 SCN3AQ9NY46 2000 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 GPSM3Q9Y4H4 160 aa13.79□□□□□ -0.2
DDX41-208ENST00000507955 TRBV23OR9-2A0A075B6M9 112 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 LCKP06239 509 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 CCR8P51685 355 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 SFSWAPQ12872 951 aaKnown RBP13.78□□□□□ -0.2
DDX41-208ENST00000507955 KEAP1Q14145 624 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 IFI44LQ53G44 452 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 SYT6Q5T7P8 510 aaPredicted RBP13.78□□□□□ -0.2
DDX41-208ENST00000507955 TRIM40Q6P9F5 258 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 P2RY8Q86VZ1 359 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 RBM45Q8IUH3 476 aaKnown RBP13.78□□□□□ -0.2
DDX41-208ENST00000507955 OR10G2Q8NGC3 310 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 RAB7BQ96AH8 199 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 TEX101Q9BY14 249 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 RSPH9Q9H1X1 276 aaPredicted RBP13.78□□□□□ -0.2
DDX41-208ENST00000507955 RNF6Q9Y252 685 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 A0A1W2PQU0 124 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 SLC22A1O15245 554 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 SH3BP5O60239 455 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 PCSK2P16519 638 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 DDCP20711 480 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 CD72P21854 359 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 CSNK1G2P78368 415 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 DNASE1L3Q13609 305 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 TP53BP2Q13625 1128 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 PUM1Q14671 1186 aaKnown RBP eCLIP13.78□□□□□ -0.26e-7■□□□□ 9.6
DDX41-208ENST00000507955 CCDC103Q8IW40 242 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 LGI4Q8N135 537 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 OR5D16Q8NGK9 328 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 SLC38A5Q8WUX1 472 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 PROX1Q92786 737 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 UBE2E3Q969T4 207 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 EPYCQ99645 322 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 MTIF3Q9H2K0 278 aaKnown RBP13.78□□□□□ -0.2
DDX41-208ENST00000507955 ANKRA2Q9H9E1 313 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 ACOT13Q9NPJ3 140 aa13.78□□□□□ -0.2
DDX41-208ENST00000507955 SCHIP1Q9P0W5 487 aaPredicted RBP13.78□□□□□ -0.2
DDX41-208ENST00000507955 TRBC2A0A5B9 178 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 PDZK1P1A8MUH7 402 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 K7EQS6 105 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 M0R3G1 203 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 KMOO15229 486 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 SEMA7AO75326 666 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 ERGP11308 486 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 TGFBR2P37173 567 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 DSTNP60981 165 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms