RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PRM3Q9NNZ6 103 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 MMP25Q9NPA2 562 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 PRTFDC1Q9NRG1 225 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 STARD5Q9NSY2 213 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 CTSFQ9UBX1 484 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 ZDHHC2Q9UIJ5 367 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 MKL2Q9ULH7 1088 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 EIF3LQ9Y262 564 aaKnown RBP7.96□□□□□ -1.14
PDGFC-205ENST00000506880 MAN2B2Q9Y2E5 1009 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 PCDHA9Q9Y5H5 950 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 ZZEF1O43149 2961 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 IGHV1-45A0A0A0MS14 117 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 GNG14A0A1W2PPG7 69 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 SAGE2PA6NJ88 616 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 FOXO6A8MYZ6 492 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 MKRN2OSH3BPM6 223 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 PPP6CO00743 305 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 SEC22BO75396 215 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 MED26O95402 600 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 ATP1B1P05026 303 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 SERPINA7P05543 415 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 CHRNGP07510 517 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 ANXA4P09525 319 aaPredicted RBP7.95□□□□□ -1.14
PDGFC-205ENST00000506880 CSNK2A2P19784 350 aaPredicted RBP7.95□□□□□ -1.14
PDGFC-205ENST00000506880 BGNP21810 368 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 CERS1P27544 350 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 PIK3R1P27986 724 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 ADSLP30566 484 aaPredicted RBP7.95□□□□□ -1.14
PDGFC-205ENST00000506880 MPIP34949 423 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 STT3AP46977 705 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 NEK2P51955 445 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 TAS2R50P59544 299 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 STX4Q12846 297 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 RUNX2Q13950 521 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 NR6A1Q15406 480 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 SPDYAQ5MJ70 313 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 DCAF10Q5QP82 559 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 NDUFAF5Q5TEU4 345 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 C6orf163Q5TEZ5 329 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 PRAMEF17Q5VTA0 474 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 NOXRED1Q6NXP6 359 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 SLC48A1Q6P1K1 146 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 Q6ZSR9 355 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 MSANTD1Q6ZTZ1 278 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 GPALPP1Q8IXQ4 340 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 KBTBD2Q8IY47 623 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 C1orf52Q8N6N3 182 aaKnown RBP7.95□□□□□ -1.14
PDGFC-205ENST00000506880 OR7G1Q8NGA0 311 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 OR11G2Q8NGC1 345 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 OR4K14Q8NGD5 310 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 CEP70Q8NHQ1 597 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 ZFP28Q8NHY6 868 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 DNAJB14Q8TBM8 379 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 ZNF675Q8TD23 568 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 RBM18Q96H35 190 aaKnown RBP7.95□□□□□ -1.14
PDGFC-205ENST00000506880 PEX11GQ96HA9 241 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 LMF1Q96S06 567 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 UBL7Q96S82 380 aaPredicted RBP7.95□□□□□ -1.14
PDGFC-205ENST00000506880 CCDC28BQ9BUN5 200 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 RABEP2Q9H5N1 569 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 ACSS1Q9NUB1 689 aaPredicted RBP7.95□□□□□ -1.14
PDGFC-205ENST00000506880 P4HTMQ9NXG6 502 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 IL17BQ9UHF5 180 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 MRPS2Q9Y399 296 aaKnown RBP7.95□□□□□ -1.14
PDGFC-205ENST00000506880 TIMM22Q9Y584 194 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 PCDHGB6Q9Y5F9 930 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 HS3ST3B1Q9Y662 390 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 ZNF780BQ9Y6R6 833 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 MAU2Q9Y6X3 613 aa7.95□□□□□ -1.14
PDGFC-205ENST00000506880 KMT2BQ9UMN6 2715 aaPredicted RBP7.95□□□□□ -1.14
PDGFC-205ENST00000506880 CPAMD8Q8IZJ3 1885 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 A0A087WV62 115 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 NSG1A0A0A6YYJ2 146 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 A0A1B0GTL3 188 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 SOCS6O14544 535 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 PIP5K1BO14986 540 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 ETHE1O95571 254 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 KLK1P06870 262 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 CTSBP07858 339 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 TROVE2P10155 538 aaKnown RBP eCLIP7.94□□□□□ -1.14
PDGFC-205ENST00000506880 IDO1P14902 403 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 LBPP18428 481 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 F8A1P23610 371 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 HPCAL1P37235 193 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 ATP4BP51164 291 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 FOXA1P55317 472 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 SRSF11Q05519 484 aaKnown RBP7.94□□□□□ -1.14
PDGFC-205ENST00000506880 ACTN3Q08043 901 aaPredicted RBP7.94□□□□□ -1.14
PDGFC-205ENST00000506880 CHAF1BQ13112 559 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 SLC13A2Q13183 592 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 PDE7AQ13946 482 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 MYBPC3Q14896 1274 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 TGIF1Q15583 401 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 MINDY4Q4G0A6 757 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 VWA2Q5GFL6 755 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 CRB2Q5IJ48 1285 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 C6orf136Q5SQH8 315 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 VWA5B1Q5TIE3 1220 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 FAM71E1Q6IPT2 247 aa7.94□□□□□ -1.14
PDGFC-205ENST00000506880 TCTN3Q6NUS6 607 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms