RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 ATOH8Q96SQ7 321 aa9.73□□□□□ -0.85
NR1I3-222ENST00000506018 MS4A8Q9BY19 250 aa9.73□□□□□ -0.85
NR1I3-222ENST00000506018 AICDAQ9GZX7 198 aa9.73□□□□□ -0.85
NR1I3-222ENST00000506018 CENPHQ9H3R5 247 aa9.73□□□□□ -0.85
NR1I3-222ENST00000506018 TRIM45Q9H8W5 580 aaPredicted RBP9.73□□□□□ -0.85
NR1I3-222ENST00000506018 MED4Q9NPJ6 270 aa9.73□□□□□ -0.85
NR1I3-222ENST00000506018 MS4A12Q9NXJ0 267 aa9.73□□□□□ -0.85
NR1I3-222ENST00000506018 SENP1Q9P0U3 644 aa9.73□□□□□ -0.85
NR1I3-222ENST00000506018 COPS7AQ9UBW8 275 aa9.73□□□□□ -0.85
NR1I3-222ENST00000506018 ZNF490Q9ULM2 529 aaPredicted RBP9.73□□□□□ -0.85
NR1I3-222ENST00000506018 YARS2Q9Y2Z4 477 aaKnown RBP9.73□□□□□ -0.85
NR1I3-222ENST00000506018 TNPO3Q9Y5L0 923 aaKnown RBP9.73□□□□□ -0.85
NR1I3-222ENST00000506018 NBPF19A0A087WUL8 3843 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 UNC79Q9P2D8 2635 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 A0A096LPK6 155 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 SMIM23A6NLE4 172 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 A8MVJ9 347 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 PRSS44E7EML9 344 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 NPIPA5E9PKD4 350 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 UBXN8O00124 270 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 TFECO14948 347 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-222ENST00000506018 HNRNPRO43390 633 aaKnown RBP9.72□□□□□ -0.85
NR1I3-222ENST00000506018 MAN1A2O60476 641 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 UGDHO60701 494 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ITGA10O75578 1167 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 C1QAP02745 245 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 SHBGP04278 402 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 SNRPAP09012 282 aaKnown RBP9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ABOP16442 354 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 KRT15P19012 456 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 CPN2P22792 545 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 COL8A1P27658 744 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 PPP2R1BP30154 601 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 TLX1P31314 330 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ARL1P40616 181 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-222ENST00000506018 SMSP52788 366 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ARFIP1P53367 373 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ALDH18A1P54886 795 aaKnown RBP9.72□□□□□ -0.85
NR1I3-222ENST00000506018 E2F2Q14209 437 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 LIPJQ5W064 366 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 GRHL2Q6ISB3 625 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 METTL2BQ6P1Q9 378 aaKnown RBP9.72□□□□□ -0.85
NR1I3-222ENST00000506018 HSDL2Q6YN16 418 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 BNC2Q6ZN30 1099 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-222ENST00000506018 CLNKQ7Z7G1 428 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 LAS2Q8IYD9 372 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 CYP4Z2PQ8N1L4 340 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ARMC10Q8N2F6 343 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ZNF808Q8N4W9 903 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-222ENST00000506018 TEX9Q8N6V9 391 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 AMER2Q8N7J2 671 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ACOT4Q8N9L9 421 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 APCDD1LQ8NCL9 501 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 MORN4Q8NDC4 146 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 OR5L2Q8NGL0 311 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 OR2W6PQ8NHA6 318 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ZNF473Q8WTR7 871 aaKnown RBP9.72□□□□□ -0.85
NR1I3-222ENST00000506018 KCTD4Q8WVF5 259 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ASB15Q8WXK1 588 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 NCLNQ969V3 563 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 RGMAQ96B86 450 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 NXNL1Q96CM4 212 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 MRRFQ96E11 262 aaKnown RBP9.72□□□□□ -0.85
NR1I3-222ENST00000506018 PGM2Q96G03 612 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 HES7Q9BYE0 225 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ALOXE3Q9BYJ1 711 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ACTR8Q9H981 624 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 TIMMDC1Q9NPL8 285 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 PRDM7Q9NQW5 492 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 SNX15Q9NRS6 342 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 IGSF5Q9NSI5 407 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 HPF1Q9NWY4 346 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 VTI1BQ9UEU0 232 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 SH3BGRL2Q9UJC5 107 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 TMCO1Q9UM00 188 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 NPIPA1Q9UND3 350 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 PPIEQ9UNP9 301 aaKnown RBP9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ERVK-11Q9UQG0 969 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 ENTPD4Q9Y227 616 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 PCDHGA11Q9Y5H2 935 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 NOTCH2Q04721 2471 aa9.72□□□□□ -0.85
NR1I3-222ENST00000506018 CYR61O00622 381 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 PRRG2O14669 202 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 ASNA1O43681 348 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 KLHL2O95198 593 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 TGFB1P01137 390 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 C2P06681 752 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 CD22P20273 847 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 HIST1H1TP22492 207 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-222ENST00000506018 BUD31P41223 144 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-222ENST00000506018 PIK3CBP42338 1070 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 SLCO1A2P46721 670 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 PCDH1Q08174 1060 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 ART3Q13508 389 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 DDX39BQ13838 428 aaKnown RBP9.71□□□□□ -0.86
NR1I3-222ENST00000506018 SETDB1Q15047 1291 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 PFKFB4Q16877 469 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 AGBL2Q5U5Z8 902 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 KHDRBS2Q5VWX1 349 aaKnown RBP9.71□□□□□ -0.86
NR1I3-222ENST00000506018 ZNF787Q6DD87 383 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms