RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	SEC22B	O75396	215 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	CLPS	P04118	112 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	FH	P07954	510 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	IL3	P08700	152 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	PIM1	P11309	404 aa	Predicted RBP	4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	G6PD	P11413	515 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	HOXB9	P17482	250 aa	Predicted RBP	4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	TCN2	P20062	427 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	S1PR1	P21453	382 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	IL10	P22301	178 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	PTPN4	P29074	926 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	RBMS1	P29558	406 aa	Known RBP	4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	SSR2	P43308	183 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	AQP5	P55064	265 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	PCBP4	P57723	403 aa	Known RBP	4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	RPL38	P63173	70 aa	Known RBP	4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	TLE3	Q04726	772 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF763	Q0D2J5	394 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	DNASE1L3	Q13609	305 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	NDUFA9	Q16795	377 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	SPRED3	Q2MJR0	410 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	TMEM164	Q5U3C3	297 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	NIPAL1	Q6NVV3	410 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	SLC48A1	Q6P1K1	146 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	KIRREL2	Q6UWL6	708 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	LANCL3	Q6ZV70	420 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	CRLF3	Q8IUI8	442 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	CACNA2D3	Q8IZS8	1091 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	KIRREL3	Q8IZU9	778 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	ENDOV	Q8N8Q3	282 aa	Known RBP	4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZSCAN1	Q8NBB4	408 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	SIMC1	Q8NDZ2	872 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	NFAM1	Q8NET5	270 aa	Predicted RBP	4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	PPP1R14C	Q8TAE6	165 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	SREK1	Q8WXA9	508 aa	Known RBP	4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	CCT6B	Q92526	530 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	TSLP	Q969D9	159 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	TBC1D20	Q96BZ9	403 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	COQ8B	Q96D53	544 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	CHMP6	Q96FZ7	201 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	PPP1R36	Q96LQ0	422 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	IMMP1L	Q96LU5	166 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	C1orf50	Q9BV19	199 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	EBPL	Q9BY08	206 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	GPR87	Q9BY21	358 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	AIG1	Q9NVV5	245 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	C5AR2	Q9P296	337 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF282	Q9UDV7	671 aa	Predicted RBP	4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	BAIAP2L1	Q9UHR4	511 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF223	Q9UK11	482 aa	Predicted RBP	4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	PCDHA9	Q9Y5H5	950 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	AK5	Q9Y6K8	562 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	IGSF10	Q6WRI0	2623 aa		4.64	□□□□□ -1.67
LMNB1-208	ENST00000504788	TMEM200C	A6NKL6	621 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	GABRR3	A8MPY1	467 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	B3GALT2	O43825	422 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	B4GALT2	O60909	372 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	CTNS	O60931	367 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	LDB3	O75112	727 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	CDC123	O75794	336 aa	Predicted RBP	4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	PSMG1	O95456	288 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	C1QC	P02747	245 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	IGKV3-11	P04433	115 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	CYC1	P08574	325 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	ANXA4	P09525	319 aa	Predicted RBP	4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	COX6A1	P12074	109 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	RNH1	P13489	461 aa	Known RBP	4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	MAOA	P21397	527 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	FBL	P22087	321 aa	Known RBP	4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	GPX3	P22352	226 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	JAK1	P23458	1154 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	MMP11	P24347	488 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	ITPKB	P27987	946 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	PTPN6	P29350	595 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	PPP2R1B	P30154	601 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	DLST	P36957	453 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	ARL1	P40616	181 aa	Predicted RBP	4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	AVPR1B	P47901	424 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	CLDN8	P56748	225 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	HSD17B7	P56937	341 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	TAS2R50	P59544	299 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	ACSM2A	Q08AH3	577 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788		Q0VFX4	171 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	DUSP8	Q13202	625 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	NR6A1	Q15406	480 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF750	Q32MQ0	723 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	TUBB8	Q3ZCM7	444 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	GALNTL6	Q49A17	601 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	EXOSC6	Q5RKV6	272 aa	Known RBP	4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	CCNYL2	Q5T2Q4	361 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	IL23R	Q5VWK5	629 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	ACSM2B	Q68CK6	577 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	FAM180B	Q6P0A1	224 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	EML6	Q6ZMW3	1958 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	SHISA6	Q6ZSJ9	500 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	VASH2	Q86V25	355 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	SPACA3	Q8IXA5	215 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	DDIAS	Q8IXT1	998 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF595	Q8IYB9	648 aa		4.63	□□□□□ -1.67
LMNB1-208	ENST00000504788	ARMC10	Q8N2F6	343 aa		4.63	□□□□□ -1.67

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