RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 SH3GLB1Q9Y371 365 aa3.98□□□□□ -1.77
PDLIM1P4-201ENST00000504327 A3GALT2U3KPV4 340 aa3.98□□□□□ -1.77
PDLIM1P4-201ENST00000504327 V9GYY5 206 aaPredicted RBP3.98□□□□□ -1.77
PDLIM1P4-201ENST00000504327 MAST2Q6P0Q8 1798 aa3.98□□□□□ -1.77
PDLIM1P4-201ENST00000504327 MROH7-TTC4A0A0A0MT08 1334 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 SF3B1O75533 1304 aaKnown RBP eCLIP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 PAPPA2Q9BXP8 1791 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 CDK5RAP2Q96SN8 1893 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 A0A087X0K7 114 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 A0A096LPK6 155 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 A0A0U1RQF3 1178 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 A0A1W2PN81 502 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 TMEM129A0AVI4 362 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 TMEM202A6NGA9 273 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 PCP4L1A6NKN8 68 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 OR52A4PA6NMU1 304 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ANKRD30BLA7E2S9 258 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 C4orf47A7E2U8 309 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 HIP1O00291 1037 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ZNF208O43345 1280 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 KLK8O60259 260 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 SNNO75324 88 aaPredicted RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 SERPINI2O75830 405 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 NEURL1O76050 574 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 F3P13726 295 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 GCFC2P16383 781 aaKnown RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 HOXB6P17509 224 aaKnown RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 DDX5P17844 614 aaKnown RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 SRD5A1P18405 259 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 MX1P20591 662 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 PAICSP22234 425 aaKnown RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 CTNNA2P26232 953 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ELAVL4P26378 380 aaKnown RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 CCKARP32238 428 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 CHRNA7P36544 502 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 SYKP43405 635 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 GPR12P47775 334 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 CDX1P47902 265 aaPredicted RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 SLC9A3P48764 834 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 MAP3K7CLP57077 242 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 SNRPEP62304 92 aaKnown RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 CBX1P83916 185 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 CCZ1BP86790 482 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 CCZ1P86791 482 aaPredicted RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 PMPCAQ10713 525 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 MELKQ14680 651 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 CLPPQ16740 277 aaPredicted RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 MEP1AQ16819 746 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ANKRD55Q3KP44 614 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 Q5PR19 223 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 FKBP1CQ5VVH2 108 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ZDHHC20Q5W0Z9 365 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 LYSMD4Q5XG99 296 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 AP1ARQ63HQ0 302 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 RUSC1-AS1Q66K80 236 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 MFSD12Q6NUT3 480 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 LRRC8BQ6P9F7 803 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 TPRG1Q6ZUI0 275 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 PAQR9Q6ZVX9 377 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 SLC16A9Q7RTY1 509 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 COMTD1Q86VU5 262 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ZC3HC1Q86WB0 502 aaKnown RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 MEX3DQ86XN8 651 aaKnown RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 GPSM1Q86YR5 675 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 TMC8Q8IU68 726 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 GRAMD2AQ8IUY3 354 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 LAX1Q8IWV1 398 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 TMEM217Q8N7C4 229 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 OR1J2Q8NGS2 313 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 OR4A16Q8NH70 328 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 RAB3IL1Q8TBN0 382 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 HM13Q8TCT9 377 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 SLC2A14Q8TDB8 520 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 SLC26A7Q8TE54 656 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 TMEM174Q8WUU8 243 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ATOH1Q92858 354 aaPredicted RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ISG20Q96AZ6 181 aaKnown RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ORAI1Q96D31 301 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ARL5BQ96KC2 179 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 MARK4Q96L34 752 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ZNF570Q96NI8 536 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ANKRD27Q96NW4 1050 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 TAAR6Q96RI8 345 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 CCDC94Q9BW85 323 aaPredicted RBP3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 GLT8D2Q9H1C3 349 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 BOLA2Q9H3K6 86 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 MAP6D1Q9H9H5 199 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 PARVGQ9HBI0 331 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 CDH20Q9HBT6 801 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 HHATLQ9HCP6 504 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 MYNNQ9NPC7 610 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 FZD3Q9NPG1 666 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 GPR173Q9NS66 373 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 QPCTLQ9NXS2 382 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 SPATA7Q9P0W8 599 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 VPS54Q9P1Q0 977 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 RHCGQ9UBD6 479 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 STK39Q9UEW8 545 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 NDRG3Q9UGV2 375 aa3.97□□□□□ -1.77
PDLIM1P4-201ENST00000504327 ZNF580Q9UK33 172 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms