RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 BEX3Q00994 111 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 CDH18Q13634 790 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 TMEM132DQ14C87 1099 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 NECTIN1Q15223 517 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 RBBP7Q16576 425 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 UGCGQ16739 394 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 LRRC73Q5JTD7 316 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 SUSD1Q6UWL2 747 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 CWC27Q6UX04 472 aaKnown RBP4.89□□□□□ -1.63
NIPBL-203ENST00000503274 CXCL17Q6UXB2 119 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 LRRTM1Q86UE6 522 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 ZNF440Q8IYI8 595 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 PYCR2Q96C36 320 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 C18orf12Q96KH6 178 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 GUCD1Q96NT3 240 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 BTBD9Q96Q07 612 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 ZNF300Q96RE9 604 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-203ENST00000503274 MGME1Q9BQP7 344 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 UBAC1Q9BSL1 405 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 WWTR1Q9GZV5 400 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.89□□□□□ -1.63
NIPBL-203ENST00000503274 ELF5Q9UKW6 265 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-203ENST00000503274 TBX21Q9UL17 535 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 CDH23Q9H251 3354 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 MCM3APO60318 1980 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 CHD7Q9P2D1 2997 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 A0A087WV48 116 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 TRBV4-1A0A0J9YWV2 114 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 ERICH2A1L162 156 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 SORBS2O94875 1100 aaKnown RBP4.88□□□□□ -1.63
NIPBL-203ENST00000503274 TBX6O95947 436 aaPredicted RBP4.88□□□□□ -1.63
NIPBL-203ENST00000503274 STAG3L1P0CL83 205 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 PDGFRAP16234 1089 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 SFTPDP35247 375 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 SOX3P41225 446 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 OR3A2P47893 321 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 MFAP3P55082 362 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 GSCP56915 257 aaPredicted RBP4.88□□□□□ -1.63
NIPBL-203ENST00000503274 RPS6P62753 249 aaKnown RBP4.88□□□□□ -1.63
NIPBL-203ENST00000503274 TAB1Q15750 504 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 STXBP2Q15833 593 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 SLC24A5Q71RS6 500 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 DNAJB7Q7Z6W7 309 aaPredicted RBP4.88□□□□□ -1.63
NIPBL-203ENST00000503274 ZNF589Q86UQ0 364 aaPredicted RBP4.88□□□□□ -1.63
NIPBL-203ENST00000503274 FBXO16Q8IX29 292 aaPredicted RBP4.88□□□□□ -1.63
NIPBL-203ENST00000503274 LRTM2Q8N967 370 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 C9orf43Q8TAL5 461 aaPredicted RBP4.88□□□□□ -1.63
NIPBL-203ENST00000503274 P2RX5Q93086 422 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 FERMT1Q9BQL6 677 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 MTG1Q9BT17 334 aaPredicted RBP4.88□□□□□ -1.63
NIPBL-203ENST00000503274 TDRD1Q9BXT4 1180 aaKnown RBP4.88□□□□□ -1.63
NIPBL-203ENST00000503274 RIMS4Q9H426 269 aaPredicted RBP4.88□□□□□ -1.63
NIPBL-203ENST00000503274 EGLN3Q9H6Z9 239 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 MRPL11Q9Y3B7 192 aaKnown RBP4.88□□□□□ -1.63
NIPBL-203ENST00000503274 SELENOKQ9Y6D0 94 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 CSNK1G3Q9Y6M4 447 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 ABCB11O95342 1321 aa4.88□□□□□ -1.63
NIPBL-203ENST00000503274 C17orf105B2RV13 164 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 CTAGE5O15320 804 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 GH1P01241 217 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 SPP1P10451 314 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 KRT5P13647 590 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 F3P13726 295 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 CASTP20810 708 aaKnown RBP4.87□□□□□ -1.63
NIPBL-203ENST00000503274 UGT1A4P22310 534 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 RFC2P35250 354 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 HNF4AP41235 474 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 CCL23P55773 120 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 SULT2A1Q06520 285 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 MTF1Q14872 753 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 USH1GQ495M9 461 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 NOTUMQ6P988 496 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 CYB5D1Q6P9G0 228 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 MOXD1Q6UVY6 613 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 METTL7BQ6UX53 244 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 CCDC60Q8IWA6 550 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-203ENST00000503274 GBP7Q8N8V2 638 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-203ENST00000503274 CCDC63Q8NA47 563 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 NUP37Q8NFH4 326 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 OR5T2Q8NGG2 359 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 RAD54LQ92698 747 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 C2orf48Q96LS8 159 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 VGLL1Q99990 258 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 CABLES2Q9BTV7 478 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 HOXD1Q9GZZ0 328 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 TRPV6Q9H1D0 765 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 ALDH8A1Q9H2A2 487 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-203ENST00000503274 RNF121Q9H920 327 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 MED20Q9H944 212 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 VAT1LQ9HCJ6 419 aa4.87□□□□□ -1.63
NIPBL-203ENST00000503274 LTBP2Q14767 1821 aa4.86□□□□□ -1.63
NIPBL-203ENST00000503274 MEX3AA1L020 520 aaKnown RBP4.86□□□□□ -1.63
NIPBL-203ENST00000503274 MPTX1A8MV57 137 aa4.86□□□□□ -1.63
NIPBL-203ENST00000503274 E9PQ18 207 aa4.86□□□□□ -1.63
NIPBL-203ENST00000503274 EIF5BO60841 1220 aaKnown RBP4.86□□□□□ -1.63
NIPBL-203ENST00000503274 GOLGA8HP0CJ92 632 aa4.86□□□□□ -1.63
NIPBL-203ENST00000503274 CAPZA1P52907 286 aa4.86□□□□□ -1.63
NIPBL-203ENST00000503274 NAGLUP54802 743 aa4.86□□□□□ -1.63
NIPBL-203ENST00000503274 DCDC1P59894 354 aa4.86□□□□□ -1.63
NIPBL-203ENST00000503274 TNK1Q13470 666 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms