RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 FBLP22087 321 aaKnown RBP4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 UQCRC2P22695 453 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 ZFP36P26651 326 aaKnown RBP4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 CBSP35520 551 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 MAP2K2P36507 400 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 ATP5C1P36542 298 aaKnown RBP4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 USP8P40818 1118 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 COMPP49747 757 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 CCL11P51671 97 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 SSTP61278 116 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 CTAG1AP78358 180 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 CUL3Q13618 768 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 NECTIN1Q15223 517 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 ALX1Q15699 326 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 PCK2Q16822 640 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 KIF19Q2TAC6 998 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 HIKESHIQ53FT3 197 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 AWAT1Q58HT5 328 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 AKNAD1Q5T1N1 836 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 LIN9Q5TKA1 542 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 PRAMEF5Q5TYX0 476 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 PRAMEF6Q5VXH4 476 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 ZDHHC20Q5W0Z9 365 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 LRRC66Q68CR7 880 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 PDPK2PQ6A1A2 396 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 ATL3Q6DD88 541 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 CBLN3Q6UW01 205 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 FAM159AQ6UWV7 190 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 PACS1Q6VY07 963 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 ARHGAP22Q7Z5H3 698 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 SERPINA11Q86U17 422 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 FAM131BQ86XD5 332 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 CD302Q8IX05 232 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 MYOCDQ8IZQ8 938 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 TRIML2Q8N7C3 387 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 SIDT2Q8NBJ9 832 aaKnown RBP4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 HMGCLL1Q8TB92 370 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 CHPT1Q8WUD6 406 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 UBTD2Q8WUN7 234 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 KAT2BQ92831 832 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 RFT1Q96AA3 541 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 C8orf76Q96K31 380 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 MARK4Q96L34 752 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 ZNF582Q96NG8 517 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 CATSPER2Q96P56 530 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 SLC22A12Q96S37 553 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 RTP3Q9BQQ7 232 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 ALKBH7Q9BT30 221 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 THAP7Q9BT49 309 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 TMEM43Q9BTV4 400 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 IQCGQ9H095 443 aaKnown RBP4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 ZSCAN16Q9H4T2 348 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 COG4Q9H9E3 785 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 MEAF6Q9HAF1 191 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 CYP3A43Q9HB55 503 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 NEK6Q9HC98 313 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 ZFP14Q9HCL3 533 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 PHPT1Q9NRX4 125 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 CYSLTR2Q9NS75 346 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 FAM120CQ9NX05 1096 aaKnown RBP4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 ASIC5Q9NY37 505 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 ANGPTL2Q9UKU9 493 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 FOXJ3Q9UPW0 622 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 KLK4Q9Y5K2 254 aa4.03□□□□□ -1.76
HMGB1P21-201ENST00000502313 PRSS51A0A1B0GVH4 220 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 TTC26A0AVF1 554 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 KCNU1A8MYU2 1149 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 H3BQV1 296 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 PDXKO00764 312 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 HSPB6O14558 160 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 YKT6O15498 198 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 RNF13O43567 381 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 FCMRO60667 390 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 WBP4O75554 376 aaKnown RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 CLPXO76031 633 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 NEURL1O76050 574 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ESRRBO95718 433 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 MT-CO3P00414 261 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 CRYGCP07315 174 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 FHP07954 510 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ADRB1P08588 477 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ELFN1P0C7U0 828 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 CETPP11597 493 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ST6GAL1P15907 406 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 EPCAMP16422 314 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF20P17024 532 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF3P17036 446 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 TPSB2P20231 275 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 U2AF2P26368 475 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 HTR2AP28223 471 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 CD1BP29016 333 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 NMT1P30419 496 aaKnown RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 SSTR1P30872 391 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 PTGER4P35408 488 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 GPR12P47775 334 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 LEPRP48357 1165 aaKnown RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 CEBPDP49716 269 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 CRYBB1P53674 252 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 CLDN8P56748 225 aa4.02□□□□□ -1.77
HMGB1P21-201ENST00000502313 SLC8A3P57103 927 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms