RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	TNNI3	P19429	210 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	CDH13	P55290	713 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	PKNOX1	P55347	436 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	TNFRSF17	Q02223	184 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	LCP2	Q13094	533 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	ELOA	Q14241	798 aa	Known RBP	9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	FAM180A	Q6UWF9	173 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	ZYG11A	Q6WRX3	759 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	SH2D5	Q6ZV89	423 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	GPRIN3	Q6ZVF9	776 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	RPS19BP1	Q86WX3	136 aa	Known RBP	9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	CRLF3	Q8IUI8	442 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	ARMC10	Q8N2F6	343 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	CISD2	Q8N5K1	135 aa	Known RBP	9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	MORN4	Q8NDC4	146 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	NFAM1	Q8NET5	270 aa	Predicted RBP	9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	OR14A16	Q8NHC5	309 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	EPS8L3	Q8TE67	593 aa	Known RBP	9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	TRPC4AP	Q8TEL6	797 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	AEN	Q8WTP8	325 aa	Known RBP	9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	SELENOM	Q8WWX9	145 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	MTFMT	Q96DP5	389 aa	Known RBP	9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	RBM18	Q96H35	190 aa	Known RBP	9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	CSF3R	Q99062	836 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	ALOXE3	Q9BYJ1	711 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	KRTAP3-3	Q9BYR6	98 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	KRTAP3-2	Q9BYR7	98 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	DEFB126	Q9BYW3	111 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	RPF2	Q9H7B2	306 aa	Known RBP	9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	PLA2G3	Q9NZ20	509 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658	NBAS	A2RRP1	2371 aa		9.83	□□□□□ -0.84
FXR1-222	ENST00000498658		A0A0A6YYD5	115 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	TLDC2	A0PJX2	215 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658		A8MUA0	341 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	PYCARD-AS1	I3L0S3	204 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	PROM1	O43490	865 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	PRAMEF2	O60811	474 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	ULK1	O75385	1050 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	ZFAND5	O76080	213 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	CRYAB	P02511	175 aa	Known RBP	9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	FAM58BP	P0C7Q3	252 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	CD46	P15529	392 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	HMOX2	P30519	316 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	BSG	P35613	385 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	HNRNPF	P52597	415 aa	Known RBP	9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	DNAJB13	P59910	316 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	PLIN5	Q00G26	463 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	SLC18A2	Q05940	514 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	ASPH	Q12797	758 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	CSTF3	Q12996	717 aa	Known RBP	9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	UNC50	Q53HI1	259 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	CFAP157	Q5JU67	520 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	LETMD1	Q6P1Q0	360 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	CLNK	Q7Z7G1	428 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	BEST3	Q8N1M1	668 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	RNF175	Q8N4F7	328 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	BCORP1	Q8N888	145 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	GBP7	Q8N8V2	638 aa	Predicted RBP	9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	CCDC63	Q8NA47	563 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	TMEM178A	Q8NBL3	297 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	TMEM52	Q8NDY8	209 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	CATSPER1	Q8NEC5	780 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	DNAJB8	Q8NHS0	232 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	METTL6	Q8TCB7	284 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	ART5	Q96L15	291 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	DGAT2	Q96PD7	388 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	TMEM237	Q96Q45	408 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	BARD1	Q99728	777 aa	Known RBP	9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	CDCP1	Q9H5V8	836 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	ASF1B	Q9NVP2	202 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	COPS7A	Q9UBW8	275 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	CLDN16	Q9Y5I7	305 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	CSAG2	Q9Y5P2	127 aa		9.82	□□□□□ -0.84
FXR1-222	ENST00000498658	TRBV11-1	A0A0K0K1C0	115 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	GABRR3	A8MPY1	467 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	TCP11X1	B4DZS4	312 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	PLIN3	O60664	434 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	LDB3	O75112	727 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	OR4F21	O95013	312 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	RASAL1	O95294	804 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	ETHE1	O95571	254 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	ESRRB	O95718	433 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	PDYN	P01213	254 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	PROC	P04070	461 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	NR2F6	P10588	404 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	EDN3	P14138	238 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	CPA3	P15088	417 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	TSPAN8	P19075	237 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	TRHR	P34981	398 aa	Predicted RBP	9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	STT3A	P46977	705 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	CYB561	P49447	251 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	MLF1	P58340	268 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	OC90	Q02509	493 aa	Predicted RBP	9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	TUBA3C	Q13748	450 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	ERCC6L	Q2NKX8	1250 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	SGO1	Q5FBB7	561 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	CCNYL2	Q5T2Q4	361 aa		9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	MRM1	Q6IN84	353 aa	Known RBP	9.81	□□□□□ -0.84
FXR1-222	ENST00000498658	TUBA3E	Q6PEY2	450 aa		9.81	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms