RNA–Protein interactions for RNA: ENST00000498268.1

USP34-222, Transcript of ubiquitin specific peptidase 34, human

TSL 3

Gene USP34, Length 497 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP34-222	ENST00000498268	FBP2	O00757	339 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	ANGPTL1	O95841	491 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	DLAT	P10515	647 aa	Known RBP	2.28	□□□□□ -2.04
USP34-222	ENST00000498268	GOT1	P17174	413 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	HMGCS2	P54868	508 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	PEX3	P56589	373 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	ABR	Q12979	859 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	TWISTNB	Q3B726	338 aa	Predicted RBP	2.28	□□□□□ -2.04
USP34-222	ENST00000498268	NHSL2	Q5HYW2	709 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	2.28	□□□□□ -2.04
USP34-222	ENST00000498268	ZCCHC12	Q6PEW1	402 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	MSANTD1	Q6ZTZ1	278 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	GLRX5	Q86SX6	157 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	MEX3D	Q86XN8	651 aa	Known RBP	2.28	□□□□□ -2.04
USP34-222	ENST00000498268	CREBRF	Q8IUR6	639 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	ZNF525	Q8N782	197 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	SMYD1	Q8NB12	490 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	NHLRC2	Q8NBF2	726 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	UXS1	Q8NBZ7	420 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	KIAA0895	Q8NCT3	520 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	GOT1L1	Q8NHS2	421 aa	Predicted RBP	2.28	□□□□□ -2.04
USP34-222	ENST00000498268	CORO2A	Q92828	525 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	MR1	Q95460	341 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	ZNF799	Q96GE5	643 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	ADPGK	Q9BRR6	497 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	LSG1	Q9H089	658 aa	Known RBP	2.28	□□□□□ -2.04
USP34-222	ENST00000498268	C10orf88	Q9H8K7	445 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	MYOZ2	Q9NPC6	264 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	SH3GLB2	Q9NR46	395 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	IARS2	Q9NSE4	1012 aa	Known RBP	2.28	□□□□□ -2.04
USP34-222	ENST00000498268	DNAJB9	Q9UBS3	223 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	SATB2	Q9UPW6	733 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	KLK4	Q9Y5K2	254 aa		2.28	□□□□□ -2.04
USP34-222	ENST00000498268	ZNFX1	Q9P2E3	1918 aa	Known RBP	2.27	□□□□□ -2.05
USP34-222	ENST00000498268		A0A1W2PRQ8	180 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	KBTBD13	C9JR72	458 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	IFIT3	O14879	490 aa	Known RBP	2.27	□□□□□ -2.05
USP34-222	ENST00000498268	SIX3	O95343	332 aa	Predicted RBP	2.27	□□□□□ -2.05
USP34-222	ENST00000498268	GLUL	P15104	373 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	CAST	P20810	708 aa	Known RBP	2.27	□□□□□ -2.05
USP34-222	ENST00000498268	CTNNA2	P26232	953 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	CCND3	P30281	292 aa	Predicted RBP	2.27	□□□□□ -2.05
USP34-222	ENST00000498268	TIA1	P31483	386 aa	Known RBP eCLIP	2.27	□□□□□ -2.05
USP34-222	ENST00000498268	HMGCL	P35914	325 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	MDH2	P40926	338 aa	Known RBP	2.27	□□□□□ -2.05
USP34-222	ENST00000498268	OR3A3	P47888	321 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	SCARB2	Q14108	478 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	ECSCR	Q19T08	205 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	ZRANB3	Q5FWF4	1079 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	VWA2	Q5GFL6	755 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	CCDC158	Q5M9N0	1113 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	HECTD3	Q5T447	861 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	MACC1	Q6ZN28	852 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	GPR141	Q7Z602	305 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	HOOK3	Q86VS8	718 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	UBQLNL	Q8IYU4	475 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	ZNF564	Q8TBZ8	553 aa	Predicted RBP	2.27	□□□□□ -2.05
USP34-222	ENST00000498268	UBLCP1	Q8WVY7	318 aa	Predicted RBP	2.27	□□□□□ -2.05
USP34-222	ENST00000498268	SGF29	Q96ES7	293 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	TSSK2	Q96PF2	358 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	PCDHB18P	Q96TA0	734 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	PARK7	Q99497	189 aa	Known RBP	2.27	□□□□□ -2.05
USP34-222	ENST00000498268	HES7	Q9BYE0	225 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	UBQLN3	Q9H347	655 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	SEPT10	Q9P0V9	454 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	DBF4	Q9UBU7	674 aa	Predicted RBP	2.27	□□□□□ -2.05
USP34-222	ENST00000498268	MGAT4A	Q9UM21	535 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	FBXO7	Q9Y3I1	522 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	HBS1L	Q9Y450	684 aa	Known RBP	2.27	□□□□□ -2.05
USP34-222	ENST00000498268	PCDHGA1	Q9Y5H4	931 aa		2.27	□□□□□ -2.05
USP34-222	ENST00000498268	CDC42BPB	Q9Y5S2	1711 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	SAP18	O00422	153 aa	Known RBP	2.26	□□□□□ -2.05
USP34-222	ENST00000498268	RHBDL1	O75783	438 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	LYPD3	O95274	346 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268		P0C879	139 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	SLC1A3	P43003	542 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	ROR1	Q01973	937 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	CETN1	Q12798	172 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	GRB14	Q14449	540 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	PPA1	Q15181	289 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	GSG1	Q2KHT4	349 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	IQCC	Q4KMZ1	466 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	ARMCX4	Q5H9R4	360 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	KLHL10	Q6JEL2	608 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	C17orf107	Q6ZR85	190 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	C15orf52	Q6ZUT6	534 aa	Known RBP	2.26	□□□□□ -2.05
USP34-222	ENST00000498268	OTOA	Q7RTW8	1153 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	NUFIP2	Q7Z417	695 aa	Known RBP	2.26	□□□□□ -2.05
USP34-222	ENST00000498268	ANKRD46	Q86W74	232 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	TUSC5	Q8IXB3	177 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	ATAD1	Q8NBU5	361 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	AFAP1L1	Q8TED9	768 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	JAKMIP1	Q96N16	626 aa	Known RBP	2.26	□□□□□ -2.05
USP34-222	ENST00000498268	SIGLEC12	Q96PQ1	595 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	ATG101	Q9BSB4	218 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	IDI2	Q9BXS1	227 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	ZBP1	Q9H171	429 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	MTIF3	Q9H2K0	278 aa	Known RBP	2.26	□□□□□ -2.05
USP34-222	ENST00000498268	CUEDC2	Q9H467	287 aa		2.26	□□□□□ -2.05
USP34-222	ENST00000498268	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	2.26	□□□□□ -2.05

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms