RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 BMP10O95393 424 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 ALBP02768 609 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 HEXBP07686 556 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 COX7A2P14406 83 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 DDCP20711 480 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 MAOAP21397 527 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 IL10P22301 178 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 ID2Q02363 134 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 FOLH1Q04609 750 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 SQLEQ14534 574 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 GSTA3Q16772 222 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 GKAP1Q5VSY0 366 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-227ENST00000498056 FAAH2Q6GMR7 532 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 FAM71E1Q6IPT2 247 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 ANKRD26P1Q6NSI1 321 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 DTX1Q86Y01 620 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 PARP9Q8IXQ6 854 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 ZNF595Q8IYB9 648 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 FAM9CQ8IZT9 166 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 MIER2Q8N344 545 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 KRTCAP2Q8N6L1 136 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 TSLPQ969D9 159 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 UCN3Q969E3 161 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 EXOSC8Q96B26 276 aaKnown RBP12.77□□□□□ -0.37
CPNE1-227ENST00000498056 PPCDCQ96CD2 204 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 CCT8L2Q96SF2 557 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 ZBTB18Q99592 522 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 BRINP2Q9C0B6 783 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 TGIF2Q9GZN2 237 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 VN1R1Q9GZP7 353 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 ACTL8Q9H568 366 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 LANCL2Q9NS86 450 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 HEY2Q9UBP5 337 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 C3orf18Q9UK00 162 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 ENTPD4Q9Y227 616 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 PCDHA9Q9Y5H5 950 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 MRPS18BQ9Y676 258 aaKnown RBP12.77□□□□□ -0.37
CPNE1-227ENST00000498056 COPG1Q9Y678 874 aaKnown RBP12.77□□□□□ -0.37
CPNE1-227ENST00000498056 NCOR2Q9Y618 2525 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 APC2O95996 2303 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 BLACEA4D250 179 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 OR2W5A6NFC9 320 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 IDSB3KWA1 339 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 C21orf140B9A014 251 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 CLDN4O14493 209 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 NDUFAB1O14561 156 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 TLX3O43711 291 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-227ENST00000498056 FGF17O60258 216 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 ONECUT2O95948 504 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 FURINP09958 794 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 RAB40ALP0C0E4 278 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 LIFP15018 202 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 PIK3R1P27986 724 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 RPL3P39023 403 aaKnown RBP12.76□□□□□ -0.37
CPNE1-227ENST00000498056 CLNS1AP54105 237 aaKnown RBP12.76□□□□□ -0.37
CPNE1-227ENST00000498056 BTG2P78543 158 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 ACTN3Q08043 901 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-227ENST00000498056 CLN3Q13286 438 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 PDCD4Q53EL6 469 aaKnown RBP12.76□□□□□ -0.37
CPNE1-227ENST00000498056 FAM180BQ6P0A1 224 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 SLC48A1Q6P1K1 146 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 QSOX2Q6ZRP7 698 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 ERMP1Q7Z2K6 904 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 TICAM1Q8IUC6 712 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 TMEM151BQ8IW70 566 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 ZNF248Q8NDW4 579 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 OR9I1Q8NGQ6 314 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 BCAS4Q8TDM0 211 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 STARD8Q92502 1023 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 GATA6Q92908 595 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 FGF11Q92914 225 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 REEP4Q9H6H4 257 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 GIMAP4Q9NUV9 329 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 UTS2RQ9UKP6 389 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 MMACHCQ9Y4U1 282 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 GPR45Q9Y5Y3 372 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 CEP295Q9C0D2 2601 aa12.76□□□□□ -0.37
CPNE1-227ENST00000498056 MYOCOSA0A1B0GUC4 107 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 VSTM2BA6NLU5 285 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 NR5A2O00482 541 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 PGRMC2O15173 223 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 PRMT3O60678 531 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 CD63P08962 238 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 C8orf89P0DMQ9 161 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 DRD2P14416 443 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 PRPS1L1P21108 318 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 PTPN4P29074 926 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 PPP2R1BP30154 601 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 NTSP30990 170 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 OTX2P32243 289 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 EFNA3P52797 238 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 UFM1P61960 85 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 RHAGQ02094 409 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 STX4Q12846 297 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 SRSF6Q13247 344 aaKnown RBP12.75□□□□□ -0.37
CPNE1-227ENST00000498056 UBAP2LQ14157 1087 aaKnown RBP12.75□□□□□ -0.37
CPNE1-227ENST00000498056 LANCL3Q6ZV70 420 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 R3HCC1LQ7Z5L2 792 aaKnown RBP12.75□□□□□ -0.37
CPNE1-227ENST00000498056 LAPTM4BQ86VI4 370 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 SCUBE1Q8IWY4 988 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms