RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 SAMSN1Q9NSI8 373 aaKnown RBP2.41□□□□□ -2.02
RIF1-212ENST00000498041 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.41□□□□□ -2.02
RIF1-212ENST00000498041 NUDT4Q9NZJ9 180 aa2.41□□□□□ -2.02
RIF1-212ENST00000498041 MOB4Q9Y3A3 225 aa2.41□□□□□ -2.02
RIF1-212ENST00000498041 LIPGQ9Y5X9 500 aa2.41□□□□□ -2.02
RIF1-212ENST00000498041 ZHX2Q9Y6X8 837 aa2.41□□□□□ -2.02
RIF1-212ENST00000498041 ANK1P16157 1881 aa2.41□□□□□ -2.02
RIF1-212ENST00000498041 DOCK1Q14185 1865 aa2.41□□□□□ -2.02
RIF1-212ENST00000498041 TRIP11Q15643 1979 aa2.4□□□□□ -2.02
RIF1-212ENST00000498041 CASP8AP2Q9UKL3 1982 aa2.4□□□□□ -2.02
RIF1-212ENST00000498041 LOC105371242A0A075B767 164 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 TRBV4-1A0A0J9YWV2 114 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 CCDC188H7C350 402 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 CCL24O00175 119 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 SOCS3O14543 225 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 CPLX1O14810 134 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 POLR2DO15514 142 aaKnown RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 LUC7L3O95232 432 aaKnown RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 BAG3O95817 575 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 SERPING1P05155 500 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 TOP1P11387 765 aaKnown RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 SCG2P13521 617 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 EPORP19235 508 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 AADACP22760 399 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 U2AF2P26368 475 aaKnown RBP eCLIP2.4□□□□□ -2.035e-13■■■■□ 22.4
RIF1-212ENST00000498041 SFTPDP35247 375 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 HMGCS2P54868 508 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 NAPAP54920 295 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 MTCP1P56278 107 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 DCDC1P59894 354 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 SP4Q02446 784 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 CACNG1Q06432 222 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 MZT1Q08AG7 82 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 TRDNQ13061 729 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 SRSF9Q13242 221 aaKnown RBP eCLIP2.4□□□□□ -2.03
RIF1-212ENST00000498041 ZNF273Q14593 569 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 CDC37Q16543 378 aaPredicted RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 RBBP7Q16576 425 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 UGCGQ16739 394 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 SNAI3Q3KNW1 292 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 FAM174BQ3ZCQ3 159 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 GLIPR1L2Q4G1C9 344 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 CES4AQ5XG92 561 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 KLHL10Q6JEL2 608 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 PPP1R21Q6ZMI0 780 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 SLC24A5Q71RS6 500 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 ERN2Q76MJ5 926 aaKnown RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 ADCK2Q7Z695 626 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 ZER1Q7Z7L7 766 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 AMIGO1Q86WK6 493 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 LYG1Q8N1E2 194 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 GBP7Q8N8V2 638 aaPredicted RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 OR4D10Q8NGI6 311 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 C9orf43Q8TAL5 461 aaPredicted RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 TBCKQ8TEA7 893 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 FAM222BQ8WU58 562 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 SNRNP27Q8WVK2 155 aaKnown RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 SEPT1Q8WYJ6 367 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 OMA1Q96E52 524 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 PAGE5Q96GU1 130 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 C2orf48Q96LS8 159 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 SPATA33Q96N06 139 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 AGAP4Q96P64 663 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 SERINC2Q96SA4 455 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 NDNQ99608 321 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 GPATCH1Q9BRR8 931 aaKnown RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 LLPHQ9BRT6 129 aaKnown RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 NACAP1Q9BZK3 213 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 SNX25Q9H3E2 840 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 CLSTN2Q9H4D0 955 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 ST6GALNAC4Q9H4F1 302 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 RPAP3Q9H6T3 665 aaPredicted RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 EGLN3Q9H6Z9 239 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 MTHFD2LQ9H903 347 aaPredicted RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 B3GAT2Q9NPZ5 323 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 NDE1Q9NXR1 346 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 PKD2L2Q9NZM6 624 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 NFKBIL1Q9UBC1 381 aaPredicted RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 IL36AQ9UHA7 158 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 WIPI2Q9Y4P8 454 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 EP400Q96L91 3159 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 MYH11P35749 1972 aa2.4□□□□□ -2.03
RIF1-212ENST00000498041 ZNF638Q14966 1978 aaKnown RBP2.4□□□□□ -2.03
RIF1-212ENST00000498041 PLXNA1Q9UIW2 1896 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 ROBO3Q96MS0 1386 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 A0A1W2PPW3 197 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 C17orf105B2RV13 164 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 SLC1A7O00341 560 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 MSH4O15457 936 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 CHMP2AO43633 222 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 DKC1O60832 514 aaKnown RBP eCLIP2.39□□□□□ -2.03
RIF1-212ENST00000498041 CSDE1O75534 798 aaKnown RBP2.39□□□□□ -2.03
RIF1-212ENST00000498041 STBD1O95210 358 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 DEXIO95424 95 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 ADCY5O95622 1261 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 CCNE2O96020 404 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 PENKP01210 267 aaPredicted RBP2.39□□□□□ -2.03
RIF1-212ENST00000498041 STAG3L1P0CL83 205 aa2.39□□□□□ -2.03
RIF1-212ENST00000498041 PNMA6AP0CW24 399 aaPredicted RBP2.39□□□□□ -2.03
RIF1-212ENST00000498041 F3P13726 295 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms