RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 C1orf226A1L170 272 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 RNASET2O00584 256 aaKnown RBP13.41□□□□□ -0.26
VPS26A-209ENST00000497564 PROM1O43490 865 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 TLX3O43711 291 aaPredicted RBP13.41□□□□□ -0.26
VPS26A-209ENST00000497564 B3GALT2O43825 422 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 BRINP1O60477 761 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 CTSBP07858 339 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 PTPN6P29350 595 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 GCGRP47871 477 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 SEPHS1P49903 392 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 TRA2AQ13595 282 aaKnown RBP eCLIP13.41□□□□□ -0.26
VPS26A-209ENST00000497564 GRM7Q14831 915 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 RTP5Q14D33 572 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 SPATS1Q496A3 300 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 DEFB134Q4QY38 66 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 ZNF385BQ569K4 471 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 NDUFAF5Q5TEU4 345 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 YOD1Q5VVQ6 348 aaPredicted RBP13.41□□□□□ -0.26
VPS26A-209ENST00000497564 BNC2Q6ZN30 1099 aaPredicted RBP13.41□□□□□ -0.26
VPS26A-209ENST00000497564 ARPINQ7Z6K5 226 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 DHDDSQ86SQ9 333 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 PDSS2Q86YH6 399 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 SLITRK4Q8IW52 837 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 FAM47BQ8NA70 645 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 VPS37AQ8NEZ2 397 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 NXPE2Q96DL1 559 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 C10orf90Q96M02 699 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 DEPDC7Q96QD5 511 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 GFM1Q96RP9 751 aaKnown RBP13.41□□□□□ -0.26
VPS26A-209ENST00000497564 THTPAQ9BU02 230 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 NRSN2Q9GZP1 204 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 SPAG4Q9NPE6 437 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 MIEF1Q9NQG6 463 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 MS4A12Q9NXJ0 267 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 KCMF1Q9P0J7 381 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 SH3BP4Q9P0V3 963 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 TMEM181Q9P2C4 612 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 ABCD2Q9UBJ2 740 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 DAPP1Q9UN19 280 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 ATG4BQ9Y4P1 393 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 PCDHA9Q9Y5H5 950 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 AK5Q9Y6K8 562 aa13.41□□□□□ -0.26
VPS26A-209ENST00000497564 A0A1W2PR48 441 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 D6RAR5 112 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 AGRPO00253 132 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 B3GALT4O96024 378 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 SLC6A2P23975 617 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 FRKP42685 505 aaPredicted RBP13.4□□□□□ -0.26
VPS26A-209ENST00000497564 SNRPNP63162 240 aaKnown RBP13.4□□□□□ -0.26
VPS26A-209ENST00000497564 TNFRSF17Q02223 184 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 PIGGQ5H8A4 983 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 SNAP47Q5SQN1 464 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 ANKRD26P1Q6NSI1 321 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 RBM44Q6ZP01 1051 aaKnown RBP13.4□□□□□ -0.26
VPS26A-209ENST00000497564 TICAM1Q8IUC6 712 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 SCUBE1Q8IWY4 988 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 ULK2Q8IYT8 1036 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 TTC29Q8NA56 475 aaPredicted RBP13.4□□□□□ -0.26
VPS26A-209ENST00000497564 GOT1L1Q8NHS2 421 aaPredicted RBP13.4□□□□□ -0.26
VPS26A-209ENST00000497564 N4BP2L2Q92802 583 aaPredicted RBP13.4□□□□□ -0.26
VPS26A-209ENST00000497564 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 CGREF1Q99674 301 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 MAPKAP1Q9BPZ7 522 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 PAIP1Q9H074 479 aaKnown RBP13.4□□□□□ -0.26
VPS26A-209ENST00000497564 ANKHQ9HCJ1 492 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 STARD5Q9NSY2 213 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 GMEB1Q9Y692 573 aa13.4□□□□□ -0.26
VPS26A-209ENST00000497564 SMG1Q96Q15 3661 aaKnown RBP13.4□□□□□ -0.26
VPS26A-209ENST00000497564 PTPRQQ9UMZ3 2332 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 IGSF10Q6WRI0 2623 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 HYKKA2RU49 373 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 A8MU76 341 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 NSA2O95478 260 aaKnown RBP13.39□□□□□ -0.27
VPS26A-209ENST00000497564 AIFM1O95831 613 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 ZCCHC18P0CG32 403 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 BUD31P41223 144 aaPredicted RBP13.39□□□□□ -0.27
VPS26A-209ENST00000497564 LIM2P55344 173 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 ITGA1P56199 1179 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 GABREP78334 506 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 ACY1Q03154 408 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 RUNX2Q13950 521 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 SPIDRQ14159 915 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 KCNAB1Q14722 419 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 MLC1Q15049 377 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 GPR19Q15760 415 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 PRSS53Q2L4Q9 553 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 MPEG1Q2M385 716 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 MUM1Q2TAK8 710 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 FAM214AQ32MH5 1076 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 C3orf38Q5JPI3 329 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 SAMD4BQ5PRF9 694 aaKnown RBP13.39□□□□□ -0.27
VPS26A-209ENST00000497564 C6orf10Q5SRN2 563 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 TLDC1Q6P9B6 456 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 C19orf48Q6RUI8 117 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 MMP21Q8N119 569 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 FBXW8Q8N3Y1 598 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 EFCAB3Q8N7B9 438 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 OR8J3Q8NGG0 315 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 TMEM125Q96AQ2 219 aa13.39□□□□□ -0.27
VPS26A-209ENST00000497564 ZNF501Q96CX3 271 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms