RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZNF490Q9ULM2 529 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 FZD1Q9UP38 647 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 IFT52Q9Y366 437 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 RNF115Q9Y4L5 304 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 DUSP10Q9Y6W6 482 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 LAMC1P11047 1609 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 COL16A1Q07092 1604 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-224ENST00000497488 ABCC11Q96J66 1382 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 KIF7Q2M1P5 1343 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 TRAV26-1A0A087WT03 109 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 HEATR9A2RTY3 570 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 NDUFS7O75251 213 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 CLN5O75503 358 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 MTRF1O75570 445 aaKnown RBP5.6□□□□□ -1.51
BRCA1-224ENST00000497488 NEBLO76041 1014 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 NDUFB10O96000 172 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 KRT14P02533 472 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 CYP1A2P05177 515 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 ODC1P11926 461 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 ANPEPP15144 967 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 CHRNB2P17787 502 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 DUTP33316 252 aaKnown RBP5.6□□□□□ -1.51
BRCA1-224ENST00000497488 CNR2P34972 360 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 LONP1P36776 959 aaKnown RBP5.6□□□□□ -1.51
BRCA1-224ENST00000497488 MNDAP41218 407 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 AP3M2P53677 418 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 MAZP56270 477 aaKnown RBP5.6□□□□□ -1.51
BRCA1-224ENST00000497488 ABATP80404 500 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 SP3Q02447 781 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 MAB21L1Q13394 359 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 TMEM132DQ14C87 1099 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 ZSWIM7Q19AV6 140 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 HKDC1Q2TB90 917 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 PIP5KL1Q5T9C9 394 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 C20orf194Q5TEA3 1177 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 TTC19Q6DKK2 380 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-224ENST00000497488 C16orf62Q7Z3J2 963 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 CPEB2Q7Z5Q1 589 aaKnown RBP5.6□□□□□ -1.51
BRCA1-224ENST00000497488 VSTM4Q8IW00 320 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 ZNF444Q8N0Y2 327 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-224ENST00000497488 GPR137CQ8N3F9 429 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 AADATQ8N5Z0 425 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 COMMD1Q8N668 190 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 COLGALT1Q8NBJ5 622 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 OR10Q1Q8NGQ4 319 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 OR9A1PQ8NGU1 263 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 SEPT8Q92599 483 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 LARP4BQ92615 738 aaKnown RBP5.6□□□□□ -1.51
BRCA1-224ENST00000497488 TSACCQ96A04 125 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-224ENST00000497488 TMIGD2Q96BF3 282 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 EFHD1Q9BUP0 239 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 RBM24Q9BX46 236 aaKnown RBP5.6□□□□□ -1.51
BRCA1-224ENST00000497488 NUSAP1Q9BXS6 441 aaKnown RBP5.6□□□□□ -1.51
BRCA1-224ENST00000497488 WWP1Q9H0M0 922 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 KCNK13Q9HB14 408 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 SEC14L3Q9UDX4 400 aa5.6□□□□□ -1.51
BRCA1-224ENST00000497488 AHDC1Q5TGY3 1603 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 CDC42BPGQ6DT37 1551 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 C1orf167Q5SNV9 1468 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 A0A1W2PPC1 479 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 CCDC162PA2VCL2 907 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 GOLGA6L9A6NEM1 432 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 TMEM191CA6NGB0 347 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 OR2AG2A6NM03 316 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 PRR32B1ATL7 298 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 E5RGE8 158 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 TMEM178BH3BS89 294 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 FOXE1O00358 373 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 TIMM23O14925 209 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 MATN3O15232 486 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 KCNAB3O43448 404 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 RNASEH1O60930 286 aaKnown RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 BMP10O95393 424 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 HIST1H2AGP0C0S8 130 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 TMEM191BP0C7N4 346 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 CT45A8P0DMV1 189 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 CT45A9P0DMV2 189 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 GP9P14770 177 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 MX1P20591 662 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 PCMT1P22061 227 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 SEC61BP60468 96 aaKnown RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 FGL1Q08830 312 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 NFATC2Q13469 925 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 P2RY14Q15391 338 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 DUSP6Q16828 381 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 KLHL40Q2TBA0 621 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 SLC9C1Q4G0N8 1177 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 CT45A2Q5DJT8 189 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 XKR3Q5GH77 459 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 C10orf120Q5SQS8 335 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 PIK3CD-AS1Q5SR53 167 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 OR4A47Q6IF82 309 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 CAPN13Q6MZZ7 669 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 Q6ZPB1 254 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 G2E3Q7L622 706 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 PRUNE1Q86TP1 453 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 PAQR7Q86WK9 346 aa5.59□□□□□ -1.51
BRCA1-224ENST00000497488 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-224ENST00000497488 MAP7D3Q8IWC1 876 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms