RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	ADAMTS19	Q8TE59	1207 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CREB3L4	Q8TEY5	395 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GTF3C2	Q8WUA4	911 aa	Predicted RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NELL1	Q92832	810 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZBED6CL	Q96FA7	236 aa	Predicted RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR5M11	Q96RB7	305 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	KCNA7	Q96RP8	456 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GML	Q99445	158 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	WDR18	Q9BV38	432 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	YARS2	Q9Y2Z4	477 aa	Known RBP	7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GPR45	Q9Y5Y3	372 aa		7.86	□□□□□ -1.15
CRNKL1-205	ENST00000496549		M0R036	132 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ARVCF	O00192	962 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TLR4	O00206	839 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CASC3	O15234	703 aa	Known RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HOXA2	O43364	376 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	IFNA10	P01566	189 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RB1	P06400	928 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FGF4	P08620	206 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CLTB	P09497	229 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SNHG28	P0DPA3	235 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DRD5	P21918	477 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ARSD	P51689	593 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TAS2R60	P59551	318 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF79	Q15937	498 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PDE12	Q6L8Q7	609 aa	Known RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	EFCAB12	Q6NXP0	572 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FUT10	Q6P4F1	479 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MRPL10	Q7Z7H8	261 aa	Known RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	C12orf40	Q86WS4	652 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LIX1	Q8N485	282 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SAMD12	Q8N8I0	201 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR7G2	Q8NG99	324 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GLYATL2	Q8WU03	294 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TM9SF4	Q92544	642 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FOXJ1	Q92949	421 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HSH2D	Q96JZ2	352 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MEGF10	Q96KG7	1140 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GSTO2	Q9H4Y5	243 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLC6A20	Q9NP91	592 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GHRL	Q9UBU3	117 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SEC14L3	Q9UDX4	400 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LTN1	O94822	1766 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RPS10-NUDT3	A0A1W2PQS6	291 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549		A0A1W2PRQ8	180 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ANXA2P2	A6NMY6	339 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	C19orf81	C9J6K1	198 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HSPA12A	O43301	675 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLC10A3	P09131	477 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF8	P17098	575 aa	Predicted RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GABRB1	P18505	474 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MATK	P42679	507 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CTBP2	P56545	445 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	EIF5A	P63241	154 aa	Known RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DPYSL2	Q16555	572 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PYCR3	Q53H96	274 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SPIN4	Q56A73	249 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ANKRD34A	Q69YU3	496 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	KDF1	Q8NAX2	398 aa	Predicted RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF516	Q92618	1163 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LENG9	Q96B70	501 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PANX1	Q96RD7	426 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GDF15	Q99988	308 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	XYLT2	Q9H1B5	865 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OSBPL2	Q9H1P3	480 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DDX31	Q9H8H2	851 aa	Known RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NOD1	Q9Y239	953 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLC45A1	Q9Y2W3	748 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MYO18A	Q92614	2054 aa	Known RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549		H7C1Q1	480 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SGK494	L7N484	410 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GPR171	O14626	319 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PLA2G10	O15496	165 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PITPNB	P48739	271 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	EFNA5	P52803	228 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CAP1	Q01518	475 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MLLT11	Q13015	90 aa	Predicted RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SPP2	Q13103	211 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	UNC50	Q53HI1	259 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ESRP1	Q6NXG1	681 aa	Known RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	C8orf82	Q6P1X6	216 aa	Predicted RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GPR149	Q86SP6	731 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NAXD	Q8IW45	347 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	C12orf29	Q8N999	325 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CNOT9	Q92600	299 aa	Known RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FATE1	Q969F0	183 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ARMC5	Q96C12	935 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SMAD5	Q99717	465 aa	Known RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMEM185B	Q9H7F4	350 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	WWOX	Q9NZC7	414 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF629	Q9UEG4	869 aa	Predicted RBP	7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CORO2B	Q9UQ03	480 aa		7.85	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZCWPW2	A0A1B0GU75	182 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	IMPA2	O14732	288 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CACNG3	O60359	315 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LAP3	P28838	519 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PTGFR	P43088	359 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RBP2	P50120	134 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PGGT1B	P53609	377 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HCCS	P53701	268 aa		7.84	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms