RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 GTF2H2Q13888 395 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 GLE1Q53GS7 698 aaKnown RBP11.85□□□□□ -0.51
PTPRF-214ENST00000496043 RNFT1Q5M7Z0 435 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 GTF2H2CQ6P1K8 395 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 IL20RBQ6UXL0 311 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 BNC2Q6ZN30 1099 aaPredicted RBP11.85□□□□□ -0.51
PTPRF-214ENST00000496043 MDGA2Q7Z553 956 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 GPR180Q86V85 440 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 OR8K3Q8NH51 312 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 ASB15Q8WXK1 588 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 TANKQ92844 425 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 ATP6V1E2Q96A05 226 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 ANKRD9Q96BM1 317 aaPredicted RBP11.85□□□□□ -0.51
PTPRF-214ENST00000496043 RBM18Q96H35 190 aaKnown RBP11.85□□□□□ -0.51
PTPRF-214ENST00000496043 GPR78Q96P69 363 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 MTERF1Q99551 399 aaKnown RBP11.85□□□□□ -0.51
PTPRF-214ENST00000496043 FUT8Q9BYC5 575 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 OR8D2Q9GZM6 311 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 RPF2Q9H7B2 306 aaKnown RBP11.85□□□□□ -0.51
PTPRF-214ENST00000496043 IPPKQ9H8X2 491 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 LIN28AQ9H9Z2 209 aaKnown RBP11.85□□□□□ -0.51
PTPRF-214ENST00000496043 HPF1Q9NWY4 346 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 PSD3Q9NYI0 1048 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 CPSF2Q9P2I0 782 aaKnown RBP11.85□□□□□ -0.51
PTPRF-214ENST00000496043 DMGDHQ9UI17 866 aaKnown RBP11.85□□□□□ -0.51
PTPRF-214ENST00000496043 TINAGQ9UJW2 476 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 NOTCH2Q04721 2471 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 CACNA1DQ01668 2161 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 ARHGAP10A1A4S6 786 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 LRRC14BA6NHZ5 514 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 H0YIV9 168 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 WWP2O00308 870 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 PRRG2O14669 202 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 TFECO14948 347 aaPredicted RBP11.84□□□□□ -0.51
PTPRF-214ENST00000496043 DYRK3O43781 588 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 ALDOAP04075 364 aaKnown RBP11.84□□□□□ -0.51
PTPRF-214ENST00000496043 TUBB4AP04350 444 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 COX7A2P14406 83 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 AGAP20933 346 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 SERPINB9P50453 376 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 RPS13P62277 151 aaKnown RBP11.84□□□□□ -0.51
PTPRF-214ENST00000496043 ID2Q02363 134 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 CPSF6Q16630 551 aaKnown RBP eCLIP11.84□□□□□ -0.51
PTPRF-214ENST00000496043 C16orf47Q6ZP98 133 aaPredicted RBP11.84□□□□□ -0.51
PTPRF-214ENST00000496043 GOLGA7Q7Z5G4 137 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 OR4N5Q8IXE1 308 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 EID3Q8N140 333 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 ZCCHC7Q8N3Z6 543 aaKnown RBP11.84□□□□□ -0.51
PTPRF-214ENST00000496043 RNF175Q8N4F7 328 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 L3MBTL4Q8NA19 623 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 C16orf52Q8NHV5 167 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 SLC2A12Q8TD20 617 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 SLC44A1Q8WWI5 657 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 MARVELD3Q96A59 401 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 SENP5Q96HI0 755 aaPredicted RBP11.84□□□□□ -0.51
PTPRF-214ENST00000496043 DGAT2Q96PD7 388 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 SORBS1Q9BX66 1292 aaKnown RBP11.84□□□□□ -0.51
PTPRF-214ENST00000496043 CHST11Q9NPF2 352 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 PHF11Q9UIL8 331 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 TMCO1Q9UM00 188 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 MEMO1Q9Y316 297 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 RNF11Q9Y3C5 154 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 CROCCQ5TZA2 2017 aa11.84□□□□□ -0.51
PTPRF-214ENST00000496043 FOXE1O00358 373 aaPredicted RBP11.83□□□□□ -0.52
PTPRF-214ENST00000496043 PLPP1O14494 284 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 PROM1O43490 865 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 KRT38O76015 456 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 OR6B1O95007 311 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 CLDN9O95484 217 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 ETHE1O95571 254 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 ACSL3O95573 720 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 CTAGE8P0CG41 777 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 COL6A2P12110 1019 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 CNR1P21554 472 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 HTR1EP28566 365 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 BUD31P41223 144 aaPredicted RBP11.83□□□□□ -0.52
PTPRF-214ENST00000496043 STT3AP46977 705 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 HK2P52789 917 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 RNF4P78317 190 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 CUL3Q13618 768 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 ZNF630Q2M218 657 aaPredicted RBP11.83□□□□□ -0.52
PTPRF-214ENST00000496043 PAOXQ6QHF9 649 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 TAOK1Q7L7X3 1001 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 DOLPP1Q86YN1 238 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 CTAGE4Q8IX94 777 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 PLD6Q8N2A8 252 aaKnown RBP11.83□□□□□ -0.52
PTPRF-214ENST00000496043 ZNF321PQ8N8H1 164 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 ZFP62Q8NB50 900 aaPredicted RBP11.83□□□□□ -0.52
PTPRF-214ENST00000496043 PSD4Q8NDX1 1056 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 SCYL1Q96KG9 808 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 RASL10BQ96S79 203 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 FMO2Q99518 471 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 CDC42EP4Q9H3Q1 356 aaKnown RBP11.83□□□□□ -0.52
PTPRF-214ENST00000496043 NOL11Q9H8H0 719 aaKnown RBP11.83□□□□□ -0.52
PTPRF-214ENST00000496043 DMRT3Q9NQL9 472 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 ZNF358Q9NW07 568 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 LYARQ9NX58 379 aaKnown RBP11.83□□□□□ -0.52
PTPRF-214ENST00000496043 COPS7AQ9UBW8 275 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 ATG4BQ9Y4P1 393 aa11.83□□□□□ -0.52
PTPRF-214ENST00000496043 NBPF19A0A087WUL8 3843 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms