RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TMPRSS11EQ9UL52 423 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 A0A0U1RQS6 177 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 NEDD8-MDP1E9PL57 170 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 TGM5O43548 720 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 SH3BP5O60239 455 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 PRAMEF4O60810 478 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 LEFTY1O75610 366 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 SCG5P05408 212 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 LCKP06239 509 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 HNRNPA1P09651 372 aaKnown RBP eCLIP10.96□□□□□ -0.65
RFC4-214ENST00000494047 TYRP14679 529 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 DDCP20711 480 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 ITGB7P26010 798 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 WEE1P30291 646 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 ZXDBP98169 803 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 C2orf80Q0P641 193 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 ST3GAL4Q11206 333 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 PPP1R8Q12972 351 aaKnown RBP10.96□□□□□ -0.65
RFC4-214ENST00000494047 EXOC3L2Q2M3D2 409 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 ATAT1Q5SQI0 421 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 PERM1Q5SV97 790 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 PRAMEF14Q5SWL7 426 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 PRAMEF9Q5VWM5 478 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 PRAMEF13Q5VWM6 474 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 LILRA6Q6PI73 481 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 TMEM220Q6QAJ8 160 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 SERPINA13PQ6UXR4 307 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 TMIGD1Q6UXZ0 262 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 Q6ZVL8 140 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 PTCHD4Q6ZW05 846 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 HSD11B1LQ7Z5J1 315 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 DSG4Q86SJ6 1040 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 SLC22A16Q86VW1 577 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 CCDC71Q8IV32 467 aaPredicted RBP10.96□□□□□ -0.65
RFC4-214ENST00000494047 KREMEN2Q8NCW0 462 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 TMIEQ8NEW7 156 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 ZNF480Q8WV37 535 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 BHMTQ93088 406 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 KIAA1143Q96AT1 154 aaPredicted RBP10.96□□□□□ -0.65
RFC4-214ENST00000494047 VOPP1Q96AW1 172 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 CAMK1GQ96NX5 476 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 WDFY2Q96P53 400 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 NECAB3Q96P71 396 aaPredicted RBP10.96□□□□□ -0.65
RFC4-214ENST00000494047 KCNC2Q96PR1 638 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 OR4K3Q96R72 315 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 FAM129BQ96TA1 746 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 DPH2Q9BQC3 489 aaPredicted RBP10.96□□□□□ -0.65
RFC4-214ENST00000494047 RAB11FIP5Q9BXF6 653 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 UCK2Q9BZX2 261 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 NUAK2Q9H093 628 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 ABCG8Q9H221 673 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 FZD3Q9NPG1 666 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.96□□□□□ -0.65
RFC4-214ENST00000494047 DOLKQ9UPQ8 538 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 SLC9A8Q9Y2E8 581 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 IFT52Q9Y366 437 aa10.96□□□□□ -0.65
RFC4-214ENST00000494047 PCM1Q15154 2024 aa10.96□□□□□ -0.66
RFC4-214ENST00000494047 DSPPQ9NZW4 1301 aa10.96□□□□□ -0.66
RFC4-214ENST00000494047 MUC3AQ02505 3323 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 TRBC2A0A5B9 178 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 OR2AG2A6NM03 316 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 A8MX80 341 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 NPC1O15118 1278 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 CASC3O15234 703 aaKnown RBP10.95□□□□□ -0.66
RFC4-214ENST00000494047 CAPN5O15484 640 aaPredicted RBP10.95□□□□□ -0.66
RFC4-214ENST00000494047 PDPK1O15530 556 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 BNIP3LO60238 219 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 PAPLNO95428 1278 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 C6orf47O95873 294 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 LGI1O95970 557 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 ADH1CP00326 375 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 ACADMP11310 421 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 TIMP2P16035 220 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 EPCAMP16422 314 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 ZNF8P17098 575 aaPredicted RBP10.95□□□□□ -0.66
RFC4-214ENST00000494047 PTPN2P17706 415 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 CFL1P23528 166 aaKnown RBP10.95□□□□□ -0.66
RFC4-214ENST00000494047 PTBP1P26599 531 aaKnown RBP eCLIP10.95□□□□□ -0.66
RFC4-214ENST00000494047 SOAT1P35610 550 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 LIPAP38571 399 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 ETV3P41162 512 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 CTSOP43234 321 aaPredicted RBP10.95□□□□□ -0.66
RFC4-214ENST00000494047 SLC15A1P46059 708 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 LIMK1P53667 647 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 OCLNQ16625 522 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 ZNF658BQ4V348 819 aaPredicted RBP10.95□□□□□ -0.66
RFC4-214ENST00000494047 DCST1Q5T197 706 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 SAXO2Q658L1 398 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 FRMPD2BQ6IN97 320 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 ZNF544Q6NX49 715 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 LIPIQ6XZB0 460 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 ADIPOR2Q86V24 386 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 C17orf64Q86WR6 236 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 NUDT13Q86X67 352 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 CADM3Q8N126 398 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 TBC1D19Q8N5T2 526 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 RASGEF1AQ8N9B8 481 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 POC5Q8NA72 575 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 PROKR2Q8NFJ6 384 aa10.95□□□□□ -0.66
RFC4-214ENST00000494047 TOR1AIP2Q8NFQ8 470 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms