RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 APRTP07741 180 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 BACE1P56817 501 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 GABPB1Q06547 395 aaPredicted RBP5.33□□□□□ -1.56
SMC2-205ENST00000493955 SCGB2A2Q13296 93 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 DRP2Q13474 957 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 SNX1Q13596 522 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 HNRNPDQ14103 355 aaKnown RBP5.33□□□□□ -1.56
SMC2-205ENST00000493955 PDIA5Q14554 519 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 WSCD2Q2TBF2 565 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 IL23RQ5VWK5 629 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 KIAA1161Q6NSJ0 714 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 CDC42EP5Q6NZY7 148 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 FAM159AQ6UWV7 190 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 TMEM26Q6ZUK4 368 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 HOGA1Q86XE5 327 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 FAM71CQ8NEG0 241 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 ZNF486Q96H40 463 aaPredicted RBP5.33□□□□□ -1.56
SMC2-205ENST00000493955 FAM218AQ96MZ4 157 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 CBWD1Q9BRT8 395 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 NMNAT2Q9BZQ4 307 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 CCSER1Q9C0I3 900 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 ECT2Q9H8V3 914 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 HPS4Q9NQG7 708 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 MED17Q9NVC6 651 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 C2orf42Q9NWW7 574 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 VPS54Q9P1Q0 977 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 U3KQV3 271 aa5.33□□□□□ -1.56
SMC2-205ENST00000493955 ANHXE9PGG2 379 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 ADAM12O43184 909 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 KCNAB3O43448 404 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 DIRAS3O95661 229 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 CALCAP01258 141 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 LYNP07948 512 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 HIST1H2AGP0C0S8 130 aaPredicted RBP5.32□□□□□ -1.56
SMC2-205ENST00000493955 RALAP11233 206 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 LIMK2P53671 638 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 TRADDQ15628 312 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 LDLRAP1Q5SW96 308 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 ABRAXAS1Q6UWZ7 409 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 Q71RC1 249 aaPredicted RBP5.32□□□□□ -1.56
SMC2-205ENST00000493955 YRDCQ86U90 279 aaKnown RBP5.32□□□□□ -1.56
SMC2-205ENST00000493955 SLC22A16Q86VW1 577 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.32□□□□□ -1.56
SMC2-205ENST00000493955 DCUN1D3Q8IWE4 304 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 COLGALT1Q8NBJ5 622 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 MINDY2Q8NBR6 621 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 ADAD2Q8NCV1 583 aaKnown RBP5.32□□□□□ -1.56
SMC2-205ENST00000493955 HIST1H2ACQ93077 130 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 CTAGE1Q96RT6 745 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 JPH2Q9BR39 696 aaPredicted RBP5.32□□□□□ -1.56
SMC2-205ENST00000493955 EGLN1Q9GZT9 426 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 NACA2Q9H009 215 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 SLC35D1Q9NTN3 355 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 ERVK-18Q9QC07 812 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 SMARCA4P51532 1647 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 KIF21AQ7Z4S6 1674 aa5.32□□□□□ -1.56
SMC2-205ENST00000493955 GLTPD2A6NH11 291 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 SHISA7A6NL88 538 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 C15orf61A6NNL5 157 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 YJEFN3A6XGL0 299 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 ARPC1BO15143 372 aaKnown RBP5.31□□□□□ -1.56
SMC2-205ENST00000493955 PEX11AO75192 247 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 SCGB2A1O75556 95 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 ANGPTL1O95841 491 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 MYOGP15173 224 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 HLA-FP30511 346 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 CHRNB4P30926 498 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 MDH1P40925 334 aaKnown RBP5.31□□□□□ -1.56
SMC2-205ENST00000493955 MYBPC1Q00872 1141 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 AFTPHQ6ULP2 937 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 FIP1L1Q6UN15 594 aaKnown RBP5.31□□□□□ -1.56
SMC2-205ENST00000493955 CHMP1BQ7LBR1 199 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 WDR49Q8IV35 697 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 PARP8Q8N3A8 854 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 OR5M9Q8NGP3 310 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 RPLP0P6Q8NHW5 317 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 GOLGA5Q8TBA6 731 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 FCGR1BQ92637 280 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 TMEM45BQ96B21 275 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 PCED1BQ96HM7 432 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 NODALQ96S42 347 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 HOXD1Q9GZZ0 328 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 ROPN1Q9HAT0 212 aaPredicted RBP5.31□□□□□ -1.56
SMC2-205ENST00000493955 UBE2TQ9NPD8 197 aaPredicted RBP5.31□□□□□ -1.56
SMC2-205ENST00000493955 ENTPD4Q9Y227 616 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 TCF19Q9Y242 345 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 ANGPTL3Q9Y5C1 460 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 ERCC6Q03468 1493 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 SH3PXD2BA1X283 911 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 CSDE1O75534 798 aaKnown RBP5.31□□□□□ -1.56
SMC2-205ENST00000493955 AK1P00568 194 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 PATE4P0C8F1 98 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 NCF1P14598 390 aaPredicted RBP5.31□□□□□ -1.56
SMC2-205ENST00000493955 CEBPBP17676 345 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 ANOS1P23352 680 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 GPR183P32249 361 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 ACADSBP45954 432 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 SLC6A8P48029 635 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 FHITP49789 147 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 MTTPP55157 894 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms