RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SEC31AO94979 1220 aaKnown RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 RTN3O95197 1032 aaPredicted RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 KCNK5O95279 499 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 ADCY5O95622 1261 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 TFAP2AP05549 437 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 RETP07949 1114 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 FREM3P0C091 2139 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 HSD3B1P14060 373 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 PON1P27169 355 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 KRT9P35527 623 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 ATP5C1P36542 298 aaKnown RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 CPOXP36551 454 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 P2RY2P41231 377 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 CASP2P42575 452 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 MTIF2P46199 727 aaKnown RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 SULT1E1P49888 294 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 RPS14P62263 151 aaKnown RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 OGDHQ02218 1023 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 BST2Q10589 180 aaKnown RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 DNAJC3Q13217 504 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 NME3Q13232 169 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 KIR2DS5Q14953 304 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 ZNF528Q3MIS6 628 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 ZNF542PQ5EBM4 170 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 OR6B2Q6IFH4 312 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 TRIM65Q6PJ69 517 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 PLXDC2Q6UX71 529 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 PACS1Q6VY07 963 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 SH2D5Q6ZV89 423 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 ADIPOR2Q86V24 386 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 P2RY8Q86VZ1 359 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 MMAAQ8IVH4 418 aaKnown RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 SIX6OS1Q8N1H7 587 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 PYROXD2Q8N2H3 581 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 STK40Q8N2I9 435 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 CHCHD4Q8N4Q1 142 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 MINDY1Q8N5J2 469 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 CCDC185Q8N715 623 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 ANKRD52Q8NB46 1076 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 PPHLN1Q8NEY8 458 aaKnown RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 UTP15Q8TED0 518 aaKnown RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 DDI1Q8WTU0 396 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 MOCOSQ96EN8 888 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 APOPT1Q96IL0 206 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 PPP1R13BQ96KQ4 1090 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 NSMCE3Q96MG7 304 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 PCDHB18PQ96TA0 734 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 TSG101Q99816 390 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 VGLL1Q99990 258 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 RBM4BQ9BQ04 359 aaKnown RBP2.82□□□□□ -1.96
PTCD3-218ENST00000493430 PSD2Q9BQI7 771 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 C11orf70Q9BRQ4 267 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 CABLES2Q9BTV7 478 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 GANQ9H2C0 597 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 CLSTN2Q9H4D0 955 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 BRF2Q9HAW0 419 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 RPS10P5Q9NQ39 176 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 TRPV5Q9NQA5 729 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 PIGVQ9NUD9 493 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 TAS2R14Q9NYV8 317 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 DEC1Q9P2X7 70 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 HAO1Q9UJM8 370 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 DNAJC12Q9UKB3 198 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 RAB23Q9ULC3 237 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 COQ4Q9Y3A0 265 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 BPTFQ12830 3046 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 CACNA1GO43497 2377 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 WDFY3Q8IZQ1 3526 aa2.82□□□□□ -1.96
PTCD3-218ENST00000493430 NCKAP5O14513 1909 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 FAM208BQ5VWN6 2430 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 BAHCC1Q9P281 2608 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 ANKRD11Q6UB99 2663 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 A0A0D9SEW6 157 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 MEIOCA2RUB1 952 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 E9PQ18 207 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 TMEM178BH3BS89 294 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 PSMA7O14818 248 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 LDLRAD4O15165 306 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 RAD51BO15315 384 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 ACSL4O60488 711 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 TRUB2O95900 331 aaKnown RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 PENKP01210 267 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 IGLV3-27P01718 113 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 PRB1P04280 392 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 IGHV4-34P06331 123 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 CTSLP07711 333 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 PLEKP08567 350 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 VDRP11473 427 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 CD59P13987 128 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 ZNF182P17025 639 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 TNFAIP3P21580 790 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 GGT5P36269 586 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 ARL1P40616 181 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 RGRP47804 291 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 CSNK1EP49674 416 aaKnown RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 TPMTP51580 245 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 BMXP51813 675 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 KCNJ10P78508 379 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 FKBP3Q00688 224 aaKnown RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 ZNF33AQ06730 810 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms