RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	DGAT2L6	Q6ZPD8	337 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	WFDC11	Q8NEX6	87 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	OR14A16	Q8NHC5	309 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	DOK4	Q8TEW6	326 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	ZNF721	Q8TF20	911 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	DAZL	Q92904	295 aa	Known RBP	12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	ESAM	Q96AP7	390 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	SARAF	Q96BY9	339 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	RHBDF1	Q96CC6	855 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	CFAP36	Q96G28	342 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	SGCZ	Q96LD1	299 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	ALPK1	Q96QP1	1244 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	F2RL3	Q96RI0	385 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	SH3GL2	Q99962	352 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	MAPKAP1	Q9BPZ7	522 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	SLC6A15	Q9H2J7	730 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	PROK2	Q9HC23	129 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	SH2D2A	Q9NP31	389 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	MRPS33	Q9Y291	106 aa	Known RBP	12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	OARD1	Q9Y530	152 aa		12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.63	□□□□□ -0.39
SAMM50-204	ENST00000493161	ABCA4	P78363	2273 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161		A0A1B0GTL3	188 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	NCF1B	A6NI72	391 aa	Predicted RBP	12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	LRRC3C	A6NJW4	275 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	NCF1C	A8MVU1	366 aa	Predicted RBP	12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	HRK	O00198	91 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	TAPBP	O15533	448 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	HCN1	O60741	890 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	FAM155B	O75949	473 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	LRAT	O95237	230 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	NCF1	P14598	390 aa	Predicted RBP	12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	CD22	P20273	847 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	BMP5	P22003	454 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	ELK3	P41970	407 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	TRPC1	P48995	793 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	DGKQ	P52824	942 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	TAS2R39	P59534	338 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	CDKL1	Q00532	357 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	PIGG	Q5H8A4	983 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	TRIM40	Q6P9F5	258 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	POMZP3	Q6PJE2	187 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	OPN5	Q6U736	354 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	LYPD8	Q6UX82	237 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	OR4N5	Q8IXE1	308 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	C9orf40	Q8IXQ3	194 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	ULK2	Q8IYT8	1036 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	SPATA6L	Q8N4H0	392 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	TNIP2	Q8NFZ5	429 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	TTL	Q8NG68	377 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	OR8K3	Q8NH51	312 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	GOT1L1	Q8NHS2	421 aa	Predicted RBP	12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	GABPB2	Q8TAK5	448 aa	Predicted RBP	12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	RUNDC3B	Q96NL0	473 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	TMEM79	Q9BSE2	394 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	ZNF703	Q9H7S9	590 aa	Predicted RBP	12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	NT5DC2	Q9H857	520 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	CHMP2B	Q9UQN3	213 aa		12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161	FLNA	P21333	2647 aa	Known RBP	12.62	□□□□□ -0.39
SAMM50-204	ENST00000493161		A0A088AWK7	358 aa		12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	ANKDD1B	A6NHY2	528 aa		12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	RTCA	O00442	366 aa	Known RBP	12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	DNALI1	O14645	258 aa	Predicted RBP	12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	SH3BGRL	O75368	114 aa		12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	FOSL1	P15407	271 aa		12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	ZNF10	P21506	573 aa	Predicted RBP	12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	FLYWCH1	Q4VC44	716 aa		12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	KRT78	Q8N1N4	520 aa		12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	OR5L2	Q8NGL0	311 aa		12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	KIAA1191	Q96A73	305 aa		12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	PPWD1	Q96BP3	646 aa	Known RBP	12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	COPS7B	Q9H9Q2	264 aa	Predicted RBP	12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	CTNNAL1	Q9UBT7	734 aa		12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	B4GALT7	Q9UBV7	327 aa		12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	CORO1C	Q9ULV4	474 aa	Predicted RBP	12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	VPS13C	Q709C8	3753 aa		12.61	□□□□□ -0.39
SAMM50-204	ENST00000493161	ABCA2	Q9BZC7	2435 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	ARHGAP21	Q5T5U3	1957 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	FAM95C	A0A1B0GW59	222 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	HSPB2	A8KAH6	182 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	FGF17	O60258	216 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	ATE1	O95260	518 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	GABRA1	P14867	456 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	TACR1	P25103	407 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	IVD	P26440	423 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	HNMT	P50135	292 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	KCNJ2	P63252	427 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	LTB	Q06643	244 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	DOC2A	Q14183	400 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	PPP1R7	Q15435	360 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	HSPB2	Q16082	182 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	MPEG1	Q2M385	716 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	SLC22A10	Q63ZE4	541 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	PAMR1	Q6UXH9	720 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	FRA10AC1	Q70Z53	315 aa		12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	ZC3HC1	Q86WB0	502 aa	Known RBP	12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	LRRC25	Q8N386	305 aa	Predicted RBP	12.6	□□□□□ -0.39
SAMM50-204	ENST00000493161	NKAP	Q8N5F7	415 aa	Known RBP	12.6	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms