RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 ELAVL2Q12926 359 aaKnown RBP3.3□□□□□ -1.88
CLK1-213ENST00000492793 GK2Q14410 553 aaPredicted RBP3.3□□□□□ -1.88
CLK1-213ENST00000492793 ZNF146Q15072 292 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 HFEQ30201 348 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 SLC10A5Q5PT55 438 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 DCAF12Q5T6F0 453 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 DDI2Q5TDH0 399 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 RTL6Q6ICC9 239 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 NEPROQ6NW34 567 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 RNF130Q86XS8 419 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 LEMD2Q8NC56 503 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 ICA1LQ8NDH6 482 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 OR4L1Q8NH43 312 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 C8orf46Q8TAG6 207 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 MIPOL1Q8TD10 442 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 PCNPQ8WW12 178 aaKnown RBP3.3□□□□□ -1.88
CLK1-213ENST00000492793 GLYATL1Q969I3 302 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 CCDC47Q96A33 483 aaKnown RBP3.3□□□□□ -1.88
CLK1-213ENST00000492793 MRPL24Q96A35 216 aaKnown RBP3.3□□□□□ -1.88
CLK1-213ENST00000492793 ESAMQ96AP7 390 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 ALKBH3Q96Q83 286 aaPredicted RBP3.3□□□□□ -1.88
CLK1-213ENST00000492793 NAP1L3Q99457 506 aaPredicted RBP3.3□□□□□ -1.88
CLK1-213ENST00000492793 S1PR3Q99500 378 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 DDX47Q9H0S4 455 aaKnown RBP3.3□□□□□ -1.88
CLK1-213ENST00000492793 TSPYL1Q9H0U9 437 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 ZDHHC6Q9H6R6 413 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 NMUR1Q9HB89 426 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 GDF3Q9NR23 364 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 HMG20BQ9P0W2 317 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 FETUBQ9UGM5 382 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 MGAT4AQ9UM21 535 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 KNSTRNQ9Y448 316 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 RNF215Q9Y6U7 377 aa3.3□□□□□ -1.88
CLK1-213ENST00000492793 ABCC9O60706 1549 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 CACNA1FO60840 1977 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 UMODL1Q5DID0 1318 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 IGHV3-20A0A0C4DH32 117 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 IGHV3-38A0A0C4DH36 116 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 LOC390937A0A1W2PQ73 354 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 TLR4O00206 839 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 OLFM2O95897 454 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 HPRP00739 348 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 MT-ND3P03897 115 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 MBL2P11226 248 aaPredicted RBP3.29□□□□□ -1.88
CLK1-213ENST00000492793 SELEP16581 610 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 STMN1P16949 149 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 EDNRAP25101 427 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 PITPNBP48739 271 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 RIDAP52758 137 aaKnown RBP3.29□□□□□ -1.88
CLK1-213ENST00000492793 RPS27AP62979 156 aaKnown RBP3.29□□□□□ -1.88
CLK1-213ENST00000492793 RAPSNQ13702 412 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 ENPP2Q13822 863 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 Q6ZRG5 221 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 ZNF440Q8IYI8 595 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 BANPQ8N9N5 519 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 SIDT2Q8NBJ9 832 aaKnown RBP3.29□□□□□ -1.88
CLK1-213ENST00000492793 ZNF485Q8NCK3 441 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 CCNYQ8ND76 341 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 OR6M1Q8NGM8 313 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 OR6F1Q8NGZ6 308 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 SPATA3Q8NHX4 192 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 LRRC15Q8TF66 581 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 NPRL2Q8WTW4 380 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.29□□□□□ -1.88
CLK1-213ENST00000492793 RPGRIP1Q96KN7 1286 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 ZNF597Q96LX8 424 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 PKP2Q99959 881 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 CHCHD5Q9BSY4 110 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 TEX13AQ9BXU3 409 aaPredicted RBP3.29□□□□□ -1.88
CLK1-213ENST00000492793 ABCG8Q9H221 673 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 PNNQ9H307 717 aaKnown RBP3.29□□□□□ -1.88
CLK1-213ENST00000492793 DDX28Q9NUL7 540 aaKnown RBP3.29□□□□□ -1.88
CLK1-213ENST00000492793 MIS18AQ9NYP9 233 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 THAP10Q9P2Z0 257 aaPredicted RBP3.29□□□□□ -1.88
CLK1-213ENST00000492793 EIF3KQ9UBQ5 218 aaKnown RBP3.29□□□□□ -1.88
CLK1-213ENST00000492793 COPS7AQ9UBW8 275 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 UBQLN2Q9UHD9 624 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 STRAPQ9Y3F4 350 aaKnown RBP3.29□□□□□ -1.88
CLK1-213ENST00000492793 PRSS21Q9Y6M0 314 aa3.29□□□□□ -1.88
CLK1-213ENST00000492793 RPGRIP1LQ68CZ1 1315 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 TRGV8A0A0C4DH27 118 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 MACROD2A1Z1Q3 448 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 IGLON5A6NGN9 336 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 YJEFN3A6XGL0 299 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 SRRM4A7MD48 611 aaKnown RBP3.28□□□□□ -1.88
CLK1-213ENST00000492793 FBP2O00757 339 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 DUSP11O75319 330 aaKnown RBP3.28□□□□□ -1.88
CLK1-213ENST00000492793 ABHD2P08910 425 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 ACADSBP45954 432 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 ATP4BP51164 291 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 CCR4P51679 360 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 CRYBA2P53672 197 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 RPL27P61353 136 aaKnown RBP3.28□□□□□ -1.88
CLK1-213ENST00000492793 GSTO1P78417 241 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 SRPXP78539 464 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 CD300CQ08708 224 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 FCHO2Q0JRZ9 810 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 P2RY14Q15391 338 aa3.28□□□□□ -1.88
CLK1-213ENST00000492793 OR1C1Q15619 314 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms