RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 DEPDC1Q5TB30 811 aa12.25□□□□□ -0.45
PRAME-213ENST00000492657 METRNLQ641Q3 311 aa12.25□□□□□ -0.45
PRAME-213ENST00000492657 VASH1Q7L8A9 365 aaPredicted RBP12.25□□□□□ -0.45
PRAME-213ENST00000492657 LINC01555Q8NAE3 123 aa12.25□□□□□ -0.45
PRAME-213ENST00000492657 OR10G2Q8NGC3 310 aa12.25□□□□□ -0.45
PRAME-213ENST00000492657 PSMA8Q8TAA3 256 aa12.25□□□□□ -0.45
PRAME-213ENST00000492657 TM4SF18Q96CE8 201 aa12.25□□□□□ -0.45
PRAME-213ENST00000492657 MACROD1Q9BQ69 325 aa12.25□□□□□ -0.45
PRAME-213ENST00000492657 MENTQ9BUN1 341 aa12.25□□□□□ -0.45
PRAME-213ENST00000492657 OSGEPL1Q9H4B0 414 aa12.25□□□□□ -0.45
PRAME-213ENST00000492657 HMG20AQ9NP66 347 aa12.25□□□□□ -0.45
PRAME-213ENST00000492657 SCN3BQ9NY72 215 aa12.25□□□□□ -0.45
PRAME-213ENST00000492657 RNF6Q9Y252 685 aa12.25□□□□□ -0.45
PRAME-213ENST00000492657 A0A1W2PP55 124 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 A0A1W2PPV9 198 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 PCDH17O14917 1159 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 SERPIND1P05546 499 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 BMP4P12644 408 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 ACP5P13686 325 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 PTGER1P34995 402 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 BSGP35613 385 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 MAPK12P53778 367 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 MVKQ03426 396 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 FCHO2Q0JRZ9 810 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 DUSP7Q16829 419 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 C2orf27AQ580R0 203 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 AGBL4Q5VU57 503 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 KHDRBS2Q5VWX1 349 aaKnown RBP12.24□□□□□ -0.45
PRAME-213ENST00000492657 TRIM40Q6P9F5 258 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 NLGN4XQ8N0W4 816 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 OR4C15Q8NGM1 316 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 OR5K2Q8NHB8 316 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 RAB8BQ92930 207 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 UBE2E3Q969T4 207 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 ZNF300Q96RE9 604 aaPredicted RBP12.24□□□□□ -0.45
PRAME-213ENST00000492657 LHX9Q9NQ69 397 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 ABCB10Q9NRK6 738 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 DPP7Q9UHL4 492 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 SLC6A14Q9UN76 642 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 PCDHGA3Q9Y5H0 932 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 B4GALT2O60909 372 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 LCKP06239 509 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 SOX9P48436 509 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 NCS1P62166 190 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 RUNX3Q13761 415 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 C9orf50Q5SZB4 431 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 OXR1Q8N573 874 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 HORMAD2Q8N7B1 307 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 RPL3LQ92901 407 aaKnown RBP12.24□□□□□ -0.45
PRAME-213ENST00000492657 PITX2Q99697 317 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 MS4A8Q9BY19 250 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 KCNK6Q9Y257 313 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 B3GNT3Q9Y2A9 372 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 STON1Q9Y6Q2 735 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 DENND4AQ7Z401 1863 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 FAM227AF5H4B4 570 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 RGS10O43665 173 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 TMPRSS11DO60235 418 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 RECKO95980 971 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 TCEA2Q15560 299 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 ADCK1Q86TW2 530 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 LGI4Q8N135 537 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 EXOSC8Q96B26 276 aaKnown RBP12.24□□□□□ -0.45
PRAME-213ENST00000492657 HRASLS5Q96KN8 279 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 FERD3LQ96RJ6 166 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 INSM2Q96T92 566 aaPredicted RBP12.24□□□□□ -0.45
PRAME-213ENST00000492657 KXD1Q9BQD3 176 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 MROQ9BYG7 248 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 TMEM38AQ9H6F2 299 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 PCDHGB1Q9Y5G3 927 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 HSPE1-MOB4S4R3N1 261 aa12.24□□□□□ -0.45
PRAME-213ENST00000492657 TRBC2A0A5B9 178 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 E9PQ18 207 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 OR1F1O43749 312 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 GABARAPO95166 117 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 ARAFP10398 606 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 ACVR2AP27037 513 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 C21orf33P30042 268 aaPredicted RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 NUDT6P53370 316 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 LRRC74AQ0VAA2 488 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 HSPB3Q12988 150 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 COL9A2Q14055 689 aaPredicted RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 CLCA4Q14CN2 919 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 IRF4Q15306 451 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 MLF2Q15773 248 aaPredicted RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 C10orf62Q5T681 223 aaPredicted RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 CEACAM20Q6UY09 585 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 ADCK2Q7Z695 626 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 UBE3DQ7Z6J8 389 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 P2RY8Q86VZ1 359 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 CCDC103Q8IW40 242 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 HDDC3Q8N4P3 179 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 C17orf50Q8WW18 174 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 AIF1LQ9BQI0 150 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 RPP25Q9BUL9 199 aaKnown RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 SLC6A17Q9H1V8 727 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 ACER3Q9NUN7 267 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 TEX10Q9NXF1 929 aaPredicted RBP12.23□□□□□ -0.45
PRAME-213ENST00000492657 PMF1-BGLAPU3KQ54 211 aa12.23□□□□□ -0.45
PRAME-213ENST00000492657 DPM1O60762 260 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms