RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 SH3GL2Q99962 352 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 ERP44Q9BS26 406 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 CNPPD1Q9BV87 410 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 AICDAQ9GZX7 198 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 TUBA8Q9NY65 449 aaPredicted RBP13.37□□□□□ -0.27
SSR4-212ENST00000491833 ATG4BQ9Y4P1 393 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 PCDHGB3Q9Y5G1 929 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 ARHGAP21Q5T5U3 1957 aa13.37□□□□□ -0.27
SSR4-212ENST00000491833 SYT5O00445 386 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 ERI3O43414 337 aaKnown RBP13.36□□□□□ -0.27
SSR4-212ENST00000491833 B3GALT2O43825 422 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 SEC31AO94979 1220 aaKnown RBP13.36□□□□□ -0.27
SSR4-212ENST00000491833 INHBBP09529 407 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 CCL3P10147 92 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 ENDOUP21128 410 aaKnown RBP13.36□□□□□ -0.27
SSR4-212ENST00000491833 BMP5P22003 454 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 RPL21P46778 160 aaKnown RBP13.36□□□□□ -0.27
SSR4-212ENST00000491833 CAV1Q03135 178 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 RUNX2Q13950 521 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 TEX35Q5T0J7 233 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 THOC6Q86W42 341 aaKnown RBP13.36□□□□□ -0.27
SSR4-212ENST00000491833 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.36□□□□□ -0.27
SSR4-212ENST00000491833 MMGT1Q8N4V1 131 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 NAT8LQ8N9F0 302 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 TTLQ8NG68 377 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 OR8K3Q8NH51 312 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 CCT6BQ92526 530 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 OR8D2Q9GZM6 311 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 ZNF703Q9H7S9 590 aaPredicted RBP13.36□□□□□ -0.27
SSR4-212ENST00000491833 WHRNQ9P202 907 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 SPRR3Q9UBC9 169 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 MTRF1LQ9UGC7 380 aaKnown RBP13.36□□□□□ -0.27
SSR4-212ENST00000491833 FOXD3Q9UJU5 478 aaPredicted RBP13.36□□□□□ -0.27
SSR4-212ENST00000491833 KCNE2Q9Y6J6 123 aa13.36□□□□□ -0.27
SSR4-212ENST00000491833 HNRNPH1P31943 449 aaKnown RBP13.35□□□□□ -0.27
SSR4-212ENST00000491833 MAGEA3P43357 314 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 RNF4P78317 190 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 SLC7A5Q01650 507 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 GUCY2DQ02846 1103 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 RCN2Q14257 317 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 DAZAP2Q15038 168 aaPredicted RBP13.35□□□□□ -0.27
SSR4-212ENST00000491833 FBXL19-AS1Q494R0 122 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 GLE1Q53GS7 698 aaKnown RBP13.35□□□□□ -0.27
SSR4-212ENST00000491833 CLEC9AQ6UXN8 241 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 KLHDC8AQ8IYD2 350 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 ULK2Q8IYT8 1036 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 AGGF1Q8N302 714 aaeCLIP13.35□□□□□ -0.27
SSR4-212ENST00000491833 OR5L2Q8NGL0 311 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 MS4A6EQ96DS6 147 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 CSF3RQ99062 836 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 LRRC1Q9BTT6 524 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 COPS7BQ9H9Q2 264 aaPredicted RBP13.35□□□□□ -0.27
SSR4-212ENST00000491833 SLC22A14Q9Y267 594 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.35□□□□□ -0.27
SSR4-212ENST00000491833 FBN3Q75N90 2809 aa13.35□□□□□ -0.27
SSR4-212ENST00000491833 EML6Q6ZMW3 1958 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 GOSR1O95249 250 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 HEXAP06865 529 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 PGAM1P18669 254 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 GSTM2P28161 218 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 HPDP32754 393 aaPredicted RBP13.34□□□□□ -0.27
SSR4-212ENST00000491833 KCNJ2P63252 427 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 STX4Q12846 297 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 CRYMQ14894 314 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 TRIM40Q6P9F5 258 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 CCDC25Q86WR0 208 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 LIX1Q8N485 282 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 ZNF321PQ8N8H1 164 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 NOA1Q8NC60 698 aaKnown RBP13.34□□□□□ -0.27
SSR4-212ENST00000491833 NAXEQ8NCW5 288 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 SLC2A12Q8TD20 617 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 PTPMT1Q8WUK0 201 aaPredicted RBP13.34□□□□□ -0.27
SSR4-212ENST00000491833 SIGLEC10Q96LC7 697 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 NEUROD4Q9HD90 331 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 SEMA4BQ9NPR2 832 aaPredicted RBP13.34□□□□□ -0.27
SSR4-212ENST00000491833 COPS7AQ9UBW8 275 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 BOKQ9UMX3 212 aaPredicted RBP13.34□□□□□ -0.27
SSR4-212ENST00000491833 DAPP1Q9UN19 280 aa13.34□□□□□ -0.27
SSR4-212ENST00000491833 HRNRQ86YZ3 2850 aaPredicted RBP13.33□□□□□ -0.28
SSR4-212ENST00000491833 MYOCOSA0A1B0GUC4 107 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 TUBAL3A6NHL2 446 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 FAM171A2A8MVW0 826 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 C17orf105B2RV13 164 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 ZNF354AO60765 605 aaPredicted RBP13.33□□□□□ -0.28
SSR4-212ENST00000491833 TNNI3P19429 210 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 CERS1P27544 350 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 GABRB3P28472 473 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 HOXC12P31275 282 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 PIGAP37287 484 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 PLA2G16P53816 162 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 PLTPP55058 493 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 LIM2P55344 173 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 DCAF7P61962 342 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 TBL3Q12788 808 aaKnown RBP13.33□□□□□ -0.28
SSR4-212ENST00000491833 SLBPQ14493 270 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSR4-212ENST00000491833 EFTUD2Q15029 972 aaKnown RBP eCLIP13.33□□□□□ -0.283e-6■■■■■ 41.9
SSR4-212ENST00000491833 PCBP2Q15366 365 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSR4-212ENST00000491833 PPP1R3AQ16821 1122 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 TMEM198Q66K66 360 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 SBSNQ6UWP8 590 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms