RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 HMX2A2RU54 273 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 H0YIV9 168 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 PEX1O43933 1283 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 KLK8O60259 260 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 OR10H2O60403 315 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 GUCY1B2O75343 617 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 ALDOAP04075 364 aaKnown RBP15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 SNRPAP09012 282 aaKnown RBP15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 TNFRSF8P28908 595 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 CCNG1P51959 295 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 PLGLB1Q02325 96 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 DLG1Q12959 904 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 CPSF6Q16630 551 aaKnown RBP eCLIP15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 RGS9BPQ6ZS82 235 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 PAGE2Q7Z2X7 111 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 VN1R5Q7Z5H4 357 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 CENPLQ8N0S6 344 aaPredicted RBP15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 SHISA5Q8N114 240 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 SGCZQ96LD1 299 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 MTERF1Q99551 399 aaKnown RBP15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 SERPINI1Q99574 410 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 NPAS2Q99743 824 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 PSD3Q9NYI0 1048 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 MYOTQ9UBF9 498 aa15.43■□□□□ 0.06
PDLIM2-217ENST00000491330 USP9YO00507 2555 aaPredicted RBP15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 IQANK1A0A1B0GTG1 560 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 C4orf51C9J302 202 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 POC1B-GALNT4F8VUJ3 575 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 SAP18O00422 153 aaKnown RBP15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 MAN1A2O60476 641 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 SH3BGRLO75368 114 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 SCELO95171 688 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 RNF224P0DH78 156 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 CD22P20273 847 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 TAC1P20366 129 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 AGAP20933 346 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 DCTP40126 519 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 MEOX1P50221 254 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 IFT88Q13099 833 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 CUL3Q13618 768 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 SP5Q6BEB4 398 aaPredicted RBP15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 GK5Q6ZS86 529 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 NUDT13Q86X67 352 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 ZCCHC7Q8N3Z6 543 aaKnown RBP15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 SLC22A8Q8TCC7 542 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 MAPKAP1Q9BPZ7 522 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 HES7Q9BYE0 225 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 AICDAQ9GZX7 198 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 TSPAN10Q9H1Z9 355 aaPredicted RBP15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 OR51B5Q9H339 312 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 COQ3Q9NZJ6 369 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 KCMF1Q9P0J7 381 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 SCN2AQ99250 2005 aa15.42■□□□□ 0.06
PDLIM2-217ENST00000491330 CYSRT1A8MQ03 144 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 FOXE1O00358 373 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 RTCAO00442 366 aaKnown RBP15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 RIPK2O43353 540 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 LDB3O75112 727 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 OR2J2O76002 312 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 P04436 131 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 STT3AP46977 705 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 IRF9Q00978 393 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 TMEM211Q6ICI0 200 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 ADGRD1Q6QNK2 874 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 IL20RBQ6UXL0 311 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 TIFABQ6ZNK6 161 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 RTL4Q6ZR62 310 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 SLC29A4Q7RTT9 530 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 GOLGA7Q7Z5G4 137 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 SLC22A16Q86VW1 577 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 SULF2Q8IWU5 870 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 DND1Q8IYX4 353 aaKnown RBP15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 CPSF7Q8N684 471 aaKnown RBP15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 PTGR2Q8N8N7 351 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 CCDC120Q96HB5 630 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 CSF3RQ99062 836 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 MRPL57Q9BQC6 102 aaKnown RBP15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 ELOVL6Q9H5J4 265 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 DMRT3Q9NQL9 472 aa15.41■□□□□ 0.06
PDLIM2-217ENST00000491330 SPTBN1Q01082 2364 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 STX16-NPEPL1H3BU86 382 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 WWP2O00308 870 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 STX16O14662 325 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 CDC40O60508 579 aaKnown RBP eCLIP15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 PRAMEF4O60810 478 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 RHOXF2BP0C7M4 288 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 MTHFD2P13995 350 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 ALOX15P16050 662 aaPredicted RBP15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 EPORP19235 508 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 COL8A1P27658 744 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 PTGS2P35354 604 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 ST13P50502 369 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 GPR143P51810 404 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 HNRNPFP52597 415 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 RPS13P62277 151 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 RNF4P78317 190 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 NDUFAF5Q5TEU4 345 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 ZNF468Q5VIY5 522 aaPredicted RBP15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 PRAMEF9Q5VWM5 478 aa15.4■□□□□ 0.06
PDLIM2-217ENST00000491330 HIST2H2BCQ6DN03 193 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms