RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CAVIN3Q969G5 261 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 VMP1Q96GC9 406 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 SMIM10Q96HG1 83 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 VKORC1Q9BQB6 163 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 RBCK1Q9BYM8 510 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 AICDAQ9GZX7 198 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 MRPL46Q9H2W6 279 aaKnown RBP9.68□□□□□ -0.86
TTC28-207ENST00000490475 ANKRD10Q9NXR5 420 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 COQ3Q9NZJ6 369 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 XPR1Q9UBH6 696 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 SH3BGRL2Q9UJC5 107 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 NPIPA1Q9UND3 350 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 PPIEQ9UNP9 301 aaKnown RBP9.68□□□□□ -0.86
TTC28-207ENST00000490475 MEMO1Q9Y316 297 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 OR2W5A6NFC9 320 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 TFECO14948 347 aaPredicted RBP9.67□□□□□ -0.86
TTC28-207ENST00000490475 B3GALT2O43825 422 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 SMIM24O75264 130 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 CLEC3AO75596 197 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 KRT15P19012 456 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 CAPN3P20807 821 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 TPP2P29144 1249 aaPredicted RBP9.67□□□□□ -0.86
TTC28-207ENST00000490475 RAB8AP61006 207 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 PMP22Q01453 160 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 LAPTM5Q13571 262 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 GTF2H2Q13888 395 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 C3AR1Q16581 482 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 HIST2H2ACQ16777 129 aaPredicted RBP9.67□□□□□ -0.86
TTC28-207ENST00000490475 PAGE2BQ5JRK9 111 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 TOR1AIP1Q5JTV8 583 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 HIST2H2AA3Q6FI13 130 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 TMEM211Q6ICI0 200 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 GTF2H2CQ6P1K8 395 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 RGS9BPQ6ZS82 235 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 RPS27LQ71UM5 84 aaKnown RBP9.67□□□□□ -0.86
TTC28-207ENST00000490475 VN1R5Q7Z5H4 357 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.67□□□□□ -0.86
TTC28-207ENST00000490475 SIAH3Q8IW03 269 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 TMEM132CQ8N3T6 1108 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 ACMSDQ8TDX5 336 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 DAZLQ92904 295 aaKnown RBP9.67□□□□□ -0.86
TTC28-207ENST00000490475 UBE2E3Q969T4 207 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 ZBTB9Q96C00 473 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 MTFMTQ96DP5 389 aaKnown RBP9.67□□□□□ -0.86
TTC28-207ENST00000490475 WDR34Q96EX3 536 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 PTCD3Q96EY7 689 aaKnown RBP9.67□□□□□ -0.86
TTC28-207ENST00000490475 NPAS2Q99743 824 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 EFCAB11Q9BUY7 163 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 C12orf65Q9H3J6 166 aaKnown RBP9.67□□□□□ -0.86
TTC28-207ENST00000490475 IPPKQ9H8X2 491 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 COPS7BQ9H9Q2 264 aaPredicted RBP9.67□□□□□ -0.86
TTC28-207ENST00000490475 SLC24A3Q9HC58 644 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 ADAP2Q9NPF8 381 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 TIMMDC1Q9NPL8 285 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 TINAGQ9UJW2 476 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 YARS2Q9Y2Z4 477 aaKnown RBP9.67□□□□□ -0.86
TTC28-207ENST00000490475 ANGPTL3Q9Y5C1 460 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 TNPO3Q9Y5L0 923 aaKnown RBP9.67□□□□□ -0.86
TTC28-207ENST00000490475 SPACA6W5XKT8 324 aa9.67□□□□□ -0.86
TTC28-207ENST00000490475 C4orf51C9J302 202 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 PPP6CO00743 305 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 ERI3O43414 337 aaKnown RBP9.66□□□□□ -0.86
TTC28-207ENST00000490475 DLX3O60479 287 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 SHOX2O60902 331 aaPredicted RBP9.66□□□□□ -0.86
TTC28-207ENST00000490475 CDH16O75309 829 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 SH3BGRLO75368 114 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 ZFAND5O76080 213 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 TBX6O95947 436 aaPredicted RBP9.66□□□□□ -0.86
TTC28-207ENST00000490475 NUDT17P0C025 328 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 MAOAP21397 527 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 SERPINB1P30740 379 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 SSR4P51571 173 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 MTTPP55157 894 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 RAB38P57729 211 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 OLR1P78380 273 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 BTN3A2P78410 334 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 BTG2P78543 158 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 PCDH1Q08174 1060 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 IFFO1Q0D2I5 559 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 SLC13A2Q13183 592 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 BIKQ13323 160 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 SERTAD2Q14140 314 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 ELAVL1Q15717 326 aaKnown RBP9.66□□□□□ -0.86
TTC28-207ENST00000490475 TBCCQ15814 346 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 ARHGAP11AQ6P4F7 1023 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 GOLGA7Q7Z5G4 137 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 SCUBE1Q8IWY4 988 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.66□□□□□ -0.86
TTC28-207ENST00000490475 C4orf33Q8N1A6 199 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 CYP4Z2PQ8N1L4 340 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 CA13Q8N1Q1 262 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 RNF175Q8N4F7 328 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 APCDD1LQ8NCL9 501 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 NFAM1Q8NET5 270 aaPredicted RBP9.66□□□□□ -0.86
TTC28-207ENST00000490475 OR2L5Q8NG80 312 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 C16orf52Q8NHV5 167 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 CA5BP1Q8WTZ4 195 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 CCT6BQ92526 530 aa9.66□□□□□ -0.86
TTC28-207ENST00000490475 NSUN5Q96P11 429 aaKnown RBP9.66□□□□□ -0.86
TTC28-207ENST00000490475 PHF12Q96QT6 1004 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms