RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PANX1Q96RD7 426 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CITED1Q99966 193 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 MMTAG2Q9BU76 263 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 TRMT61BQ9BVS5 477 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 TM6SF1Q9BZW5 370 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 DCLRE1BQ9H816 532 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 Q9H8V8 135 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PANK3Q9H999 370 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 FARSBQ9NSD9 589 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 UTP6Q9NYH9 597 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 GTSE1Q9NYZ3 720 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 FOXJ3Q9UPW0 622 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 MRPS33Q9Y291 106 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 TMED7Q9Y3B3 224 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PIK3C2AO00443 1686 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 MYOM1P52179 1685 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 KIF1AQ12756 1690 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CAMTA1Q9Y6Y1 1673 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 KIAA0232Q92628 1395 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 COL18A1P39060 1754 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 AKAP12Q02952 1782 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PCDH11YQ9BZA8 1340 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 ABCA3Q99758 1704 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 NRKQ7Z2Y5 1582 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 A0A096LPK6 155 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 A0A1W2PP11 408 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 OR2M5A3KFT3 312 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CLEC18AA5D8T8 446 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CASTOR2A6NHX0 329 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 MEI4A8MW99 385 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 H3BMM5 538 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 MAPK13O15264 365 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 RRP8O43159 456 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 NMT2O60551 498 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CIB2O75838 187 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 FLOT1O75955 427 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 MT-ND1P03886 318 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 F7P08709 466 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 MMP10P09238 476 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 STAG3L1P0CL83 205 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 HAPLN1P10915 354 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 ACP2P11117 423 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CPA3P15088 417 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 EPCAMP16422 314 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CHMLP26374 656 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 SSTR1P30872 391 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 HOXD3P31249 432 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 TNFRSF4P43489 277 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 FMO5P49326 533 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 TNFSF10P50591 281 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CLDN20P56880 219 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 XIAPP98170 497 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 SP3Q02447 781 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 ENPEPQ07075 957 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CUL3Q13618 768 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 STK11Q15831 433 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CARTPTQ16568 116 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 FILIP1LQ4L180 1135 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 HSP90B2PQ58FF3 399 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 OTUD1Q5VV17 481 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 GGNBP1Q5YKI7 109 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 ATL3Q6DD88 541 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 ZNF367Q7RTV3 350 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PCDH20Q8N6Y1 951 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 MAB21L3Q8N8X9 362 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 SPERTQ8NA61 448 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 THAP8Q8NA92 274 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CLEC18CQ8NCF0 446 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 OR5R1Q8NH85 324 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 OLIG1Q8TAK6 271 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 LIPHQ8WWY8 451 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 ATL1Q8WXF7 558 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PROX1Q92786 737 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 RPL3LQ92901 407 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PYCR2Q96C36 320 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PGM2Q96G03 612 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PRMT1Q99873 361 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC39A3Q9BRY0 314 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 THAP2Q9H0W7 228 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 ATG10Q9H0Y0 220 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 UPF2Q9HAU5 1272 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 FANCEQ9HB96 536 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 RNF146Q9NTX7 359 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 KLHL9Q9P2J3 617 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PISDQ9UG56 409 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 FZD10Q9ULW2 581 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 DLGAP4Q9Y2H0 992 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 NOSIPQ9Y314 301 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 NFAT5O94916 1531 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 EIF3AQ14152 1382 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 KTN1Q86UP2 1357 aaKnown RBP2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 PARD3Q8TEW0 1356 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 MON2Q7Z3U7 1717 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 GLI3P10071 1580 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 OVOS2A0A0J9YW53 1432 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 ATRNO75882 1429 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 OVOS2Q6IE36 1432 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 SLIT3O75094 1523 aa2.92□□□□□ -1.94
DEPDC1-204ENST00000489862 SRRM4A7MD48 611 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms