RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 ARHGAP22Q7Z5H3 698 aa20.46■□□□□ 0.87
SMC4-221ENST00000489573 CA13Q8N1Q1 262 aa20.46■□□□□ 0.87
SMC4-221ENST00000489573 PRSS33Q8NF86 280 aa20.46■□□□□ 0.87
SMC4-221ENST00000489573 OR9A4Q8NGU2 314 aa20.46■□□□□ 0.87
SMC4-221ENST00000489573 OR5P2Q8WZ92 322 aa20.46■□□□□ 0.87
SMC4-221ENST00000489573 GFM1Q96RP9 751 aaKnown RBP20.46■□□□□ 0.87
SMC4-221ENST00000489573 KCTD14Q9BQ13 255 aaPredicted RBP20.46■□□□□ 0.87
SMC4-221ENST00000489573 ECSITQ9BQ95 431 aa20.46■□□□□ 0.87
SMC4-221ENST00000489573 IKZF5Q9H5V7 419 aa20.46■□□□□ 0.87
SMC4-221ENST00000489573 PRDM9Q9NQV7 894 aa20.46■□□□□ 0.87
SMC4-221ENST00000489573 ACSS1Q9NUB1 689 aaPredicted RBP20.46■□□□□ 0.87
SMC4-221ENST00000489573 TAS2R9Q9NYW1 312 aa20.46■□□□□ 0.87
SMC4-221ENST00000489573 FTSJ1Q9UET6 329 aa20.46■□□□□ 0.87
SMC4-221ENST00000489573 CES1P1Q9UKY3 287 aa20.46■□□□□ 0.87
SMC4-221ENST00000489573 A0A0A6YYC8 382 aaPredicted RBP20.45■□□□□ 0.86
SMC4-221ENST00000489573 H3BMH7 237 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 I3L1I5 382 aaPredicted RBP20.45■□□□□ 0.86
SMC4-221ENST00000489573 CDX4O14627 284 aaPredicted RBP20.45■□□□□ 0.86
SMC4-221ENST00000489573 RDH16O75452 317 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 MANFP55145 182 aaKnown RBP20.45■□□□□ 0.86
SMC4-221ENST00000489573 MS4A2Q01362 244 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 TRAP1Q12931 704 aaKnown RBP20.45■□□□□ 0.86
SMC4-221ENST00000489573 BNIP2Q12982 314 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 GAB1Q13480 694 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 COL9A2Q14055 689 aaPredicted RBP20.45■□□□□ 0.86
SMC4-221ENST00000489573 OR52E8Q6IFG1 317 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 C10orf67Q8IYJ2 551 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 TRIML2Q8N7C3 387 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 OR5T3Q8NGG3 340 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 CCDC74BQ96LY2 380 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 CSF3RQ99062 836 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 EDEM2Q9BV94 578 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 FANCEQ9HB96 536 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 GIMAP4Q9NUV9 329 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 ENTPD4Q9Y227 616 aa20.45■□□□□ 0.86
SMC4-221ENST00000489573 CLIC1O00299 241 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 ACOT8O14734 319 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 FOXS1O43638 330 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 ERAL1O75616 437 aaKnown RBP20.44■□□□□ 0.86
SMC4-221ENST00000489573 BCAS2O75934 225 aaPredicted RBP20.44■□□□□ 0.86
SMC4-221ENST00000489573 NSA2O95478 260 aaKnown RBP20.44■□□□□ 0.86
SMC4-221ENST00000489573 GP1BAP07359 652 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 PPIBP23284 216 aaKnown RBP20.44■□□□□ 0.86
SMC4-221ENST00000489573 ACP1P24666 158 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 RAB38P57729 211 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 MLC1Q15049 377 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 FBXW10Q5XX13 1052 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 IFNEQ86WN2 208 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 OR1L3Q8NH93 324 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 ZFP28Q8NHY6 868 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 JADE3Q92613 823 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 BBS4Q96RK4 519 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 PCDHAC1Q9H158 963 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 NEUROD4Q9HD90 331 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 BCAP29Q9UHQ4 241 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 PSME2Q9UL46 239 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 CROCCQ5TZA2 2017 aa20.44■□□□□ 0.86
SMC4-221ENST00000489573 COL5A1P20908 1838 aaPredicted RBP20.43■□□□□ 0.86
SMC4-221ENST00000489573 WASHC1A8K0Z3 465 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 EVPLLA8MZ36 301 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 NTN3O00634 580 aaPredicted RBP20.43■□□□□ 0.86
SMC4-221ENST00000489573 ITGA1P56199 1179 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 SHC2P98077 582 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 SPEM2Q0P670 501 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 CCNIQ14094 377 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 SPIDRQ14159 915 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 FAM214AQ32MH5 1076 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 GPR135Q8IZ08 494 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 OR10A6Q8NH74 314 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 ZFP90Q8TF47 636 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 MUC13Q9H3R2 512 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 RPF2Q9H7B2 306 aaKnown RBP20.43■□□□□ 0.86
SMC4-221ENST00000489573 KAT8Q9H7Z6 458 aaKnown RBP20.43■□□□□ 0.86
SMC4-221ENST00000489573 TPT1P8Q9HAU6 139 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 TMEM9BQ9NQ34 198 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 FGF21Q9NSA1 209 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 CUTCQ9NTM9 273 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 GMEB1Q9Y692 573 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 UNC13CQ8NB66 2214 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 MUC6Q6W4X9 2439 aa20.43■□□□□ 0.86
SMC4-221ENST00000489573 MYO1GB0I1T2 1018 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 D6RAR5 112 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 STAMBPO95630 424 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 CD59P13987 128 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 HTR1EP28566 365 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 SOAT1P35610 550 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 AVPR1BP47901 424 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 SIM1P81133 766 aaPredicted RBP20.42■□□□□ 0.86
SMC4-221ENST00000489573 ACY1Q03154 408 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 TLDC1Q6P9B6 456 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 ZNF551Q7Z340 670 aaPredicted RBP20.42■□□□□ 0.86
SMC4-221ENST00000489573 DTWD1Q8N5C7 304 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 STMN2Q93045 179 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 ZNF501Q96CX3 271 aaPredicted RBP20.42■□□□□ 0.86
SMC4-221ENST00000489573 CNRIP1Q96F85 164 aaPredicted RBP20.42■□□□□ 0.86
SMC4-221ENST00000489573 ZNF583Q96ND8 569 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 AMDHD1Q96NU7 426 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 SLC35A5Q9BS91 424 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 TRIM4Q9C037 500 aa20.42■□□□□ 0.86
SMC4-221ENST00000489573 GLIPR2Q9H4G4 154 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms