RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 MPPE1Q53F39 396 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 SPANXN4Q5MJ08 99 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 OTUD3Q5T2D3 398 aaPredicted RBP3.74□□□□□ -1.81
XRN1-213ENST00000489241 CES4AQ5XG92 561 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 TRIM65Q6PJ69 517 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 FAM159AQ6UWV7 190 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 CACUL1Q86Y37 369 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 LACC1Q8IV20 430 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 WDR49Q8IV35 697 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 ELMOD1Q8N336 334 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 LRRC17Q8N6Y2 441 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 CCDC197Q8NCU1 140 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 ADAD2Q8NCV1 583 aaKnown RBP3.74□□□□□ -1.81
XRN1-213ENST00000489241 OR52B4Q8NGK2 314 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 OR6M1Q8NGM8 313 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 ZNRF4Q8WWF5 429 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 P3H4Q92791 437 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 OMA1Q96E52 524 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 ZNF274Q96GC6 653 aaPredicted RBP3.74□□□□□ -1.81
XRN1-213ENST00000489241 RPGRIP1Q96KN7 1286 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 FAM218AQ96MZ4 157 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 PGLYRP2Q96PD5 576 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 F2RL3Q96RI0 385 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 CBWD1Q9BRT8 395 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 PITPNM3Q9BZ71 974 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 NMNAT2Q9BZQ4 307 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 SLC26A1Q9H2B4 701 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 FNDC4Q9H6D8 234 aaPredicted RBP3.74□□□□□ -1.81
XRN1-213ENST00000489241 MRTO4Q9UKD2 239 aaKnown RBP3.74□□□□□ -1.81
XRN1-213ENST00000489241 U3KQV3 271 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 ANHXE9PGG2 379 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 SLC1A7O00341 560 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 KHDRBS3O75525 346 aaKnown RBP3.73□□□□□ -1.81
XRN1-213ENST00000489241 SCGB2A1O75556 95 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 AP2A2O94973 939 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 GLRA1P23415 457 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 CHRNB4P30926 498 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 FEN1P39748 380 aaKnown RBP3.73□□□□□ -1.81
XRN1-213ENST00000489241 LIMK2P53671 638 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 XGP55808 180 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 BACE1P56817 501 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 HSPA14Q0VDF9 509 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 PDZK1IP1Q13113 114 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 EXOSC7Q15024 291 aaKnown RBP3.73□□□□□ -1.81
XRN1-213ENST00000489241 AGKQ53H12 422 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 TEX35Q5T0J7 233 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 HIST2H2AA3Q6FI13 130 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 AFTPHQ6ULP2 937 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 Q6ZVQ6 151 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 MCM10Q7L590 875 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 YRDCQ86U90 279 aaKnown RBP3.73□□□□□ -1.81
XRN1-213ENST00000489241 DND1Q8IYX4 353 aaKnown RBP3.73□□□□□ -1.81
XRN1-213ENST00000489241 DCLK2Q8N568 766 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 TRIM58Q8NG06 486 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 OR5AP2Q8NGF4 316 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 OR10G8Q8NGN5 311 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 U2AF1L4Q8WU68 220 aaKnown RBP3.73□□□□□ -1.81
XRN1-213ENST00000489241 SELENOMQ8WWX9 145 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 TRIM44Q96DX7 344 aaPredicted RBP3.73□□□□□ -1.81
XRN1-213ENST00000489241 DTNBP1Q96EV8 351 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 THUMPD2Q9BTF0 503 aaKnown RBP3.73□□□□□ -1.81
XRN1-213ENST00000489241 WWP1Q9H0M0 922 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 ROPN1Q9HAT0 212 aaPredicted RBP3.73□□□□□ -1.81
XRN1-213ENST00000489241 HPS4Q9NQG7 708 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 ZNF71Q9NQZ8 489 aaPredicted RBP3.73□□□□□ -1.81
XRN1-213ENST00000489241 TBK1Q9UHD2 729 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 DIMT1Q9UNQ2 313 aaKnown RBP3.73□□□□□ -1.81
XRN1-213ENST00000489241 PLCL2Q9UPR0 1127 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 ATG4BQ9Y4P1 393 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 SELENOKQ9Y6D0 94 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 RAD54L2Q9Y4B4 1467 aa3.73□□□□□ -1.81
XRN1-213ENST00000489241 ZMYM6O95789 1325 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 ARID2Q68CP9 1835 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 IGHV4-4A0A075B6R2 117 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 A0A087WZY1 265 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 hCG_38984A0A1B0GV85 526 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 A0A1W2PR80 420 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 PRR23AA6NEV1 266 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 SHISA7A6NL88 538 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 YJEFN3A6XGL0 299 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 SIGLEC5O15389 551 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 B4GAT1O43505 415 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 LANCL1O43813 399 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 EML2O95834 649 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 APRTP07741 180 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 HSPA5P11021 654 aaKnown RBP3.72□□□□□ -1.81
XRN1-213ENST00000489241 RALAP11233 206 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 PTPN4P29074 926 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 HLA-FP30511 346 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 SLC6A8P48029 635 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 NUMBP49757 651 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 MTTPP55157 894 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 MYBPC1Q00872 1141 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 DRP2Q13474 957 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 SNX1Q13596 522 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 EFTUD2Q15029 972 aaKnown RBP eCLIP3.72□□□□□ -1.81
XRN1-213ENST00000489241 TEAD2Q15562 447 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 CCDC6Q16204 474 aa3.72□□□□□ -1.81
XRN1-213ENST00000489241 ZNF528Q3MIS6 628 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms