RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PIPOXQ9P0Z9 390 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 BCAP29Q9UHQ4 241 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 UTS2RQ9UKP6 389 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 IFT52Q9Y366 437 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 LOXL2Q9Y4K0 774 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 LRP12Q9Y561 859 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 TRAV25A0A0B4J276 109 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 KIR2DS5A0A0G2JLQ3 304 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 ATP6AP2A0A1C7CYW4 349 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 TTC26A0AVF1 554 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 HEATR9A2RTY3 570 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 DPPA5A6NC42 116 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 BTBD17A6NE02 478 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 C2CD4BA6NLJ0 364 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 SNTNA6NMZ2 147 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 PRR32B1ATL7 298 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 STMND1H3BQB6 276 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 J3KR12 359 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 K7ERQ8 282 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 KIR2DS3K7RE56 304 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 TRDMT1O14717 391 aaKnown RBP3.11□□□□□ -1.91
PRPF4-203ENST00000488937 HSPA12AO43301 675 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 SYT7O43581 403 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 GPR137BO60478 399 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 RNASEH1O60930 286 aaKnown RBP3.11□□□□□ -1.91
PRPF4-203ENST00000488937 CDH16O75309 829 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 GMNNO75496 209 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 CLN5O75503 358 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 KRT36O76013 467 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 SNAI1O95863 264 aaPredicted RBP3.11□□□□□ -1.91
PRPF4-203ENST00000488937 EPOP01588 193 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 CELA2AP08217 269 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 ANPEPP15144 967 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 FOSL2P15408 326 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 PRKACAP17612 351 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 AMD1P17707 334 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 PCMT1P22061 227 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 GNLYP22749 145 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 AVPR1AP37288 418 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 USP8P40818 1118 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 VAMP7P51809 220 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 THOP1P52888 689 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 NAPAP54920 295 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 CDH4P55283 916 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 CDH12P55289 794 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 SEC61GP60059 68 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 BNC1Q01954 994 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 EEF1A2Q05639 463 aaKnown RBP3.11□□□□□ -1.91
PRPF4-203ENST00000488937 GABPAQ06546 454 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF415Q09FC8 603 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 TMEM132DQ14C87 1099 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 HERC3Q15034 1050 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 NONOQ15233 471 aaKnown RBP eCLIP3.11□□□□□ -1.91
PRPF4-203ENST00000488937 TMEM44Q2T9K0 475 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 ARMCX4Q5H9R4 360 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 EARS2Q5JPH6 523 aaKnown RBP3.11□□□□□ -1.91
PRPF4-203ENST00000488937 ELFN2Q5R3F8 820 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 AGBL2Q5U5Z8 902 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 PDPK2PQ6A1A2 396 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 ATL3Q6DD88 541 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 TTC19Q6DKK2 380 aaPredicted RBP3.11□□□□□ -1.91
PRPF4-203ENST00000488937 HIST2H2AA3Q6FI13 130 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 ZSCAN25Q6NSZ9 544 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 FUT10Q6P4F1 479 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 CYP4V2Q6ZWL3 525 aaPredicted RBP3.11□□□□□ -1.91
PRPF4-203ENST00000488937 SHFQ7M4L6 423 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 SLC29A4Q7RTT9 530 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 COMTD1Q86VU5 262 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 COMMD2Q86X83 199 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 CD302Q8IX05 232 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 MMD2Q8IY49 270 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 DSELQ8IZU8 1212 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 RDM1Q8NG50 284 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 FGFBP3Q8TAT2 258 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 HMGCLL1Q8TB92 370 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 GLYATL2Q8WU03 294 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 CCDC107Q8WV48 283 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 DAZLQ92904 295 aaKnown RBP3.11□□□□□ -1.91
PRPF4-203ENST00000488937 SLC25A36Q96CQ1 311 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 LGALS12Q96DT0 336 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 FAM84BQ96KN1 310 aaPredicted RBP3.11□□□□□ -1.91
PRPF4-203ENST00000488937 PANX1Q96RD7 426 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 CITED1Q99966 193 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 OMDQ99983 421 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 BPIFA3Q9BQP9 254 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 LZTS2Q9BRK4 669 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 PRRG4Q9BZD6 226 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 NACA2Q9H009 215 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 KLK15Q9H2R5 256 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 TMEM185BQ9H7F4 350 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 MARCH7Q9H992 704 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 PARVGQ9HBI0 331 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 ACKR4Q9NPB9 350 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 LHX3Q9UBR4 397 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 PISDQ9UG56 409 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 FZD10Q9ULW2 581 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 SATB2Q9UPW6 733 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 CA5BQ9Y2D0 317 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 TMED3Q9Y3Q3 217 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 RIPK3Q9Y572 518 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms