RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 CROCCQ5TZA2 2017 aa11.15□□□□□ -0.63
APTX-227ENST00000485479 GOLGA8QA0A0J9YX86 632 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 GOLGA8OA6NCC3 632 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 GOLGA8NF8WBI6 632 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 K7EM74 188 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 LRATO95237 230 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 IL3P08700 152 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 NR2F6P10588 404 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 HSD3B1P14060 373 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 HSD3B2P26439 372 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 TIA1P31483 386 aaKnown RBP eCLIP11.14□□□□□ -0.63
APTX-227ENST00000485479 FOLH1Q04609 750 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 LY6DQ14210 128 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 DCAF10Q5QP82 559 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 ANKRD26P1Q6NSI1 321 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 DGAT2L6Q6ZPD8 337 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 NPLQ9BXD5 320 aaPredicted RBP11.14□□□□□ -0.63
APTX-227ENST00000485479 ROGDIQ9GZN7 287 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 LRTM1Q9HBL6 345 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 LYRM4Q9HD34 91 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 THAP1Q9NVV9 213 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 AHSPQ9NZD4 102 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 LHX6Q9UPM6 363 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 ATRXP46100 2492 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 DOCK10Q96BY6 2186 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 IGHV1-45A0A0A0MS14 117 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 PEX12O00623 359 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 RGS14O43566 566 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 RSL1D1O76021 490 aaKnown RBP11.14□□□□□ -0.63
APTX-227ENST00000485479 ANXA4P09525 319 aaPredicted RBP11.14□□□□□ -0.63
APTX-227ENST00000485479 HK2P52789 917 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 GUCY1A3Q02108 690 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 KIAA0040Q15053 153 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 PCOLCEQ15113 449 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 LINC00303Q3SY05 128 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 TUBB8Q3ZCM7 444 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 SPIN4Q56A73 249 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 XKR7Q5GH72 579 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 C10orf62Q5T681 223 aaPredicted RBP11.14□□□□□ -0.63
APTX-227ENST00000485479 ATG16L1Q676U5 607 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 NIPAL1Q6NVV3 410 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 TMEM205Q6UW68 189 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 QSOX2Q6ZRP7 698 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 PAGE2Q7Z2X7 111 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 MAVSQ7Z434 540 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 CPEB2Q7Z5Q1 589 aaKnown RBP11.14□□□□□ -0.63
APTX-227ENST00000485479 SCUBE1Q8IWY4 988 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 LRRC8CQ8TDW0 803 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 ANKRD9Q96BM1 317 aaPredicted RBP11.14□□□□□ -0.63
APTX-227ENST00000485479 TM4SF18Q96CE8 201 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 TUBGCP3Q96CW5 907 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 C11orf24Q96F05 449 aaPredicted RBP11.14□□□□□ -0.63
APTX-227ENST00000485479 TSSK3Q96PN8 268 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 WDR77Q9BQA1 342 aaPredicted RBP11.14□□□□□ -0.63
APTX-227ENST00000485479 WDR55Q9H6Y2 383 aaPredicted RBP11.14□□□□□ -0.63
APTX-227ENST00000485479 PRDM9Q9NQV7 894 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 PSD3Q9NYI0 1048 aa11.14□□□□□ -0.63
APTX-227ENST00000485479 KALRNO60229 2985 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 IGKV3D-11A0A0A0MRZ8 115 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 NSG1A0A0A6YYJ2 146 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 DYNC1I1O14576 645 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 MYO1DO94832 1006 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 IFNA16P05015 189 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 EPHA3P29320 983 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 BUD31P41223 144 aaPredicted RBP11.13□□□□□ -0.63
APTX-227ENST00000485479 TSFMP43897 325 aaKnown RBP11.13□□□□□ -0.63
APTX-227ENST00000485479 GYS2P54840 703 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 POLE2P56282 527 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 OR4D2P58180 307 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 DUSP2Q05923 314 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 STX4Q12846 297 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 PRSS53Q2L4Q9 553 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 NOXRED1Q6NXP6 359 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 BORAQ6PGQ7 559 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 PAPD4Q6PIY7 484 aaKnown RBP11.13□□□□□ -0.63
APTX-227ENST00000485479 PCSK4Q6UW60 755 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 KIF2BQ8N4N8 673 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 ZNF321PQ8N8H1 164 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 C16orf78Q8WTQ4 265 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 SNRNP27Q8WVK2 155 aaKnown RBP11.13□□□□□ -0.63
APTX-227ENST00000485479 ALOXE3Q9BYJ1 711 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 NMRK1Q9NWW6 199 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 C1orf109Q9NX04 203 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 LYARQ9NX58 379 aaKnown RBP11.13□□□□□ -0.63
APTX-227ENST00000485479 PHF11Q9UIL8 331 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 SPACA6W5XKT8 324 aa11.13□□□□□ -0.63
APTX-227ENST00000485479 TCRBV16S1A1N1A0A5B0 115 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 HRKO00198 91 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 SLC28A1O00337 649 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 CLDN4O14493 209 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 AKAP10O43572 662 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 ERAL1O75616 437 aaKnown RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 F10P00742 488 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 CD63P08962 238 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 ITGA3P26006 1051 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 PTGR1Q14914 329 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 BTBD16Q32M84 506 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 FCRLBQ6BAA4 426 aa11.12□□□□□ -0.63
APTX-227ENST00000485479 WDR75Q8IWA0 830 aaKnown RBP11.12□□□□□ -0.63
APTX-227ENST00000485479 ZNF595Q8IYB9 648 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms