RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PPP2R1BP30154 601 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 BUD31P41223 144 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-213ENST00000485080 SLC18A1P54219 525 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 SLC26A5P58743 744 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 SLC13A2Q13183 592 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 GALNT18Q6P9A2 607 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 ISLR2Q6UXK2 745 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 COMMD6Q7Z4G1 85 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 NFAM1Q8NET5 270 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-213ENST00000485080 ELP5Q8TE02 316 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 CHTF18Q8WVB6 975 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 ANKRD9Q96BM1 317 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-213ENST00000485080 METTL2AQ96IZ6 378 aaKnown RBP16.65■□□□□ 0.26
SREBF1-213ENST00000485080 KCNA7Q96RP8 456 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 MRPL1Q9BYD6 325 aaKnown RBP16.65■□□□□ 0.26
SREBF1-213ENST00000485080 ACPTQ9BZG2 426 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 CENPHQ9H3R5 247 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 RPF2Q9H7B2 306 aaKnown RBP16.65■□□□□ 0.26
SREBF1-213ENST00000485080 ADAP2Q9NPF8 381 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 FBXW2Q9UKT8 454 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 TIMM22Q9Y584 194 aa16.65■□□□□ 0.26
SREBF1-213ENST00000485080 MYO18BQ8IUG5 2567 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 A0A1W2PR48 441 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 SUV39H1O43463 412 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 KLK1P06870 262 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 ITGAMP11215 1152 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 H2AFXP16104 143 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-213ENST00000485080 SERPINB4P48594 390 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 HTR6P50406 440 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 FOXA1P55317 472 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 TRA2BP62995 288 aaKnown RBP16.64■□□□□ 0.25
SREBF1-213ENST00000485080 MFAP5Q13361 173 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 RAPSNQ13702 412 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 ELAVL1Q15717 326 aaKnown RBP16.64■□□□□ 0.25
SREBF1-213ENST00000485080 BTBD16Q32M84 506 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 SPIN4Q56A73 249 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 LGI4Q8N135 537 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 BRIX1Q8TDN6 353 aaKnown RBP16.64■□□□□ 0.25
SREBF1-213ENST00000485080 TLCD1Q96CP7 247 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 MECRQ9BV79 373 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 RNF32Q9H0A6 362 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 TMBIM4Q9HC24 238 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 EML4Q9HC35 981 aaKnown RBP16.64■□□□□ 0.25
SREBF1-213ENST00000485080 TNFRSF12AQ9NP84 129 aa16.64■□□□□ 0.25
SREBF1-213ENST00000485080 GOLGA6L10A6NI86 522 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 AZIN1O14977 448 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 GUCY1B2O75343 617 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 CELA2AP08217 269 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 NR2F6P10588 404 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 GPR143P51810 404 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 STX4Q12846 297 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 MPP2Q14168 576 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 ARL13AQ5H913 290 aaPredicted RBP16.63■□□□□ 0.25
SREBF1-213ENST00000485080 CCNYL2Q5T2Q4 361 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 CUZD1Q86UP6 607 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 ARMC10Q8N2F6 343 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 TMEM132CQ8N3T6 1108 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 EFCAB3Q8N7B9 438 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 RBMXL3Q8N7X1 1067 aaKnown RBP16.63■□□□□ 0.25
SREBF1-213ENST00000485080 TEX19Q8NA77 164 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 B3GNT7Q8NFL0 401 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 HBEGFQ99075 208 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 ALOXE3Q9BYJ1 711 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 WDR41Q9HAD4 459 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 TEKT2Q9UIF3 430 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 MCM8Q9UJA3 840 aa16.63■□□□□ 0.25
SREBF1-213ENST00000485080 ARHGAP10A1A4S6 786 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 CRCPO75575 148 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 SNUPNO95149 360 aaKnown RBP16.62■□□□□ 0.25
SREBF1-213ENST00000485080 GPR75O95800 540 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 AIFM1O95831 613 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 CHN1P15882 459 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 PRPH2P23942 346 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 GALNSP34059 522 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 CASRP41180 1078 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 MAPK12P53778 367 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 C18orf63Q68DL7 685 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 PTRH1Q86Y79 214 aaKnown RBP16.62■□□□□ 0.25
SREBF1-213ENST00000485080 NUDCD3Q8IVD9 361 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 ZADH2Q8N4Q0 377 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 C1orf52Q8N6N3 182 aaKnown RBP16.62■□□□□ 0.25
SREBF1-213ENST00000485080 OR14A16Q8NHC5 309 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 FAM76AQ8TAV0 307 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 DNAJB14Q8TBM8 379 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 DAZLQ92904 295 aaKnown RBP16.62■□□□□ 0.25
SREBF1-213ENST00000485080 PNPLA2Q96AD5 504 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 EPS8L2Q9H6S3 715 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 ZBTB20Q9HC78 741 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-213ENST00000485080 ARGLU1Q9NWB6 273 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-213ENST00000485080 CCL27Q9Y4X3 112 aa16.62■□□□□ 0.25
SREBF1-213ENST00000485080 FGF17O60258 216 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 LDB3O75112 727 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 RSL1D1O76021 490 aaKnown RBP16.61■□□□□ 0.25
SREBF1-213ENST00000485080 MYO1DO94832 1006 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 GBAP04062 536 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 SERPINB3P29508 390 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 GSTM5P46439 218 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 STT3AP46977 705 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 HMGCS1Q01581 520 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 NDUFAF5Q5TEU4 345 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms