RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 PTX3P26022 381 aaPredicted RBP11.45□□□□□ -0.58
MSH5-216ENST00000484309 TNFRSF8P28908 595 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 BSGP35613 385 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 MLF1P58340 268 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 TNFRSF17Q02223 184 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 ELAVL1Q15717 326 aaKnown RBP11.45□□□□□ -0.58
MSH5-216ENST00000484309 UNC50Q53HI1 259 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 TCHHL1Q5QJ38 904 aaPredicted RBP11.45□□□□□ -0.58
MSH5-216ENST00000484309 FRG2Q64ET8 278 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 LETMD1Q6P1Q0 360 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 METTL2BQ6P1Q9 378 aaKnown RBP11.45□□□□□ -0.58
MSH5-216ENST00000484309 CYP20A1Q6UW02 462 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 GPR180Q86V85 440 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 NUDT13Q86X67 352 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 ST6GALNAC3Q8NDV1 305 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 UCN3Q969E3 161 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 ANKRD9Q96BM1 317 aaPredicted RBP11.45□□□□□ -0.58
MSH5-216ENST00000484309 C5orf34Q96MH7 638 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 TMEM237Q96Q45 408 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 FRG2BQ96QU4 278 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 HBEGFQ99075 208 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 SLX1AQ9BQ83 275 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 MRPL1Q9BYD6 325 aaKnown RBP11.45□□□□□ -0.58
MSH5-216ENST00000484309 OR8D2Q9GZM6 311 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 FARSBQ9NSD9 589 aaKnown RBP11.45□□□□□ -0.58
MSH5-216ENST00000484309 LRFN1Q9P244 771 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 FETUBQ9UGM5 382 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.45□□□□□ -0.58
MSH5-216ENST00000484309 ATG4BQ9Y4P1 393 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 CLCA3PQ9Y6N3 262 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 V9GYY5 206 aaPredicted RBP11.45□□□□□ -0.58
MSH5-216ENST00000484309 EXPH5Q8NEV8 1989 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 A0A0A6YYD5 115 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 C17orf105B2RV13 164 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 NEURL1O76050 574 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 OTCP00480 354 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 PDYNP01213 254 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 EDN3P14138 238 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 KRT15P19012 456 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 MST1P26927 711 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 GPR143P51810 404 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 KCNK10P57789 538 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 VSNL1P62760 191 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 HERVK_113P63132 956 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 FOLH1Q04609 750 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 CLCQ05315 142 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 IFT88Q13099 833 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 CUL3Q13618 768 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 TERF2Q15554 542 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 INAQ16352 499 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 ZNF678Q5SXM1 525 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 DGAT2L6Q6ZPD8 337 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 GALNTL5Q7Z4T8 443 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 LGI4Q8N135 537 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 TMEM132CQ8N3T6 1108 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 ZCCHC7Q8N3Z6 543 aaKnown RBP11.44□□□□□ -0.58
MSH5-216ENST00000484309 OR2W6PQ8NHA6 318 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 PTPMT1Q8WUK0 201 aaPredicted RBP11.44□□□□□ -0.58
MSH5-216ENST00000484309 NR4A3Q92570 626 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 PPWD1Q96BP3 646 aaKnown RBP11.44□□□□□ -0.58
MSH5-216ENST00000484309 SERPINI1Q99574 410 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 C1QTNF3Q9BXJ4 246 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 ERVK-6Q9BXR3 956 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 TSPAN10Q9H1Z9 355 aaPredicted RBP11.44□□□□□ -0.58
MSH5-216ENST00000484309 C12orf65Q9H3J6 166 aaKnown RBP11.44□□□□□ -0.58
MSH5-216ENST00000484309 ELOVL6Q9H5J4 265 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 RPF2Q9H7B2 306 aaKnown RBP11.44□□□□□ -0.58
MSH5-216ENST00000484309 VTI1BQ9UEU0 232 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 PHF11Q9UIL8 331 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 ERRFI1Q9UJM3 462 aaPredicted RBP11.44□□□□□ -0.58
MSH5-216ENST00000484309 ZNF225Q9UK10 706 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 EMCNQ9ULC0 261 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 OSGIN2Q9Y236 505 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 COL12A1Q99715 3063 aa11.44□□□□□ -0.58
MSH5-216ENST00000484309 A0A1W2PR48 441 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 FOXE1O00358 373 aaPredicted RBP11.43□□□□□ -0.58
MSH5-216ENST00000484309 FCHO1O14526 889 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 ITGA10O75578 1167 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 SLC25A12O75746 678 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 WISP2O76076 250 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 AIFM1O95831 613 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 DDAH2O95865 285 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 FAM58BPP0C7Q3 252 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 NR2F6P10588 404 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 CD46P15529 392 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 ATP5F1P24539 256 aaPredicted RBP11.43□□□□□ -0.58
MSH5-216ENST00000484309 HSD17B3P37058 310 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 BUD31P41223 144 aaPredicted RBP11.43□□□□□ -0.58
MSH5-216ENST00000484309 TDGF1P3P51864 188 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 SERTAD2Q14140 314 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 MAPKAPK3Q16644 382 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 GGTA1PQ4G0N0 100 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 ZNF324BQ6AW86 544 aaPredicted RBP11.43□□□□□ -0.58
MSH5-216ENST00000484309 MRM1Q6IN84 353 aaKnown RBP11.43□□□□□ -0.58
MSH5-216ENST00000484309 ZNF227Q86WZ6 799 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 CDYL2Q8N8U2 506 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 EIF1ADQ8N9N8 165 aaKnown RBP11.43□□□□□ -0.58
MSH5-216ENST00000484309 OR14A16Q8NHC5 309 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 SLC2A12Q8TD20 617 aa11.43□□□□□ -0.58
MSH5-216ENST00000484309 ACMSDQ8TDX5 336 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms