RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 ZNF486Q96H40 463 aaPredicted RBP3.17□□□□□ -1.9
CLCC1-209ENST00000482889 TCEANC2Q96MN5 208 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 S1PR3Q99500 378 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 LPAR4Q99677 370 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 EDEM2Q9BV94 578 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 FTHL17Q9BXU8 183 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 MTMR12Q9C0I1 747 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 RAB33BQ9H082 229 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 WWP1Q9H0M0 922 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 ATG10Q9H0Y0 220 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 HPS4Q9NQG7 708 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 ECHDC1Q9NTX5 307 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 RNF186Q9NXI6 227 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 ZNF319Q9P2F9 582 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 DBF4Q9UBU7 674 aaPredicted RBP3.17□□□□□ -1.9
CLCC1-209ENST00000482889 EPHA6Q9UF33 1036 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 ELF5Q9UKW6 265 aaPredicted RBP3.17□□□□□ -1.9
CLCC1-209ENST00000482889 PLCL2Q9UPR0 1127 aa3.17□□□□□ -1.9
CLCC1-209ENST00000482889 MRPS2Q9Y399 296 aaKnown RBP3.17□□□□□ -1.9
CLCC1-209ENST00000482889 CUX2O14529 1486 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 SCN5AQ14524 2016 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 A0A1B0GUV1 79 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 TRIM49BA6NDI0 452 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 YJEFN3A6XGL0 299 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 TMEM110-MUSTN1A8MSY1 372 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 UBXN8O00124 270 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 PES1O00541 588 aaKnown RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 SDHDO14521 159 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 ZNF195O14628 629 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 MCF2LO15068 1137 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 EPHB6O15197 1021 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 SIGLEC5O15389 551 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 VPS26AO75436 327 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 TRMUO75648 421 aaKnown RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 CA3P07451 260 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 CT45A8P0DMV1 189 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 CT45A9P0DMV2 189 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 ERVK-10P10266 1014 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 PAX1P15863 534 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 RPS2P15880 293 aaKnown RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 RPL35AP18077 110 aaKnown RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 CASQ1P31415 396 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 FCGR2BP31994 310 aaPredicted RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 ADRA1AP35348 466 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 MTIF2P46199 727 aaKnown RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 THBS3P49746 956 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 CCR4P51679 360 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 GEMP55040 296 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 HERV-K104P61576 105 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 NAAAQ02083 359 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 CNTN2Q02246 1040 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 SNTB2Q13425 540 aaKnown RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 ITPK1Q13572 414 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 KEAP1Q14145 624 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 BTG3Q14201 252 aaPredicted RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 GRB14Q14449 540 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 MTF1Q14872 753 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 ZSWIM7Q19AV6 140 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 PDLIM3Q53GG5 364 aaPredicted RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 BOLA3Q53S33 107 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 CT45A2Q5DJT8 189 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 C9orf50Q5SZB4 431 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 DCAF12Q5T6F0 453 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 RIPPLY2Q5TAB7 128 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 TCEAL6Q6IPX3 200 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 SLC22A16Q86VW1 577 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 ZDHHC17Q8IUH5 632 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 DND1Q8IYX4 353 aaKnown RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 PARP8Q8N3A8 854 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 FAM89BQ8N5H3 189 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 STPG4Q8N801 248 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 TRIM58Q8NG06 486 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 CASP10Q92851 521 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 AZIN2Q96A70 460 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 ZNF524Q96C55 264 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 PCDHB18PQ96TA0 734 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 TXN2Q99757 166 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 TMEM204Q9BSN7 226 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 NLNQ9BYT8 704 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 PANK2Q9BZ23 570 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 TMEM117Q9H0C3 514 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 MARCH7Q9H992 704 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 CD93Q9NPY3 652 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 PPANQ9NQ55 473 aaKnown RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 ZNF71Q9NQZ8 489 aaPredicted RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 GTSE1Q9NYZ3 720 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 LHX3Q9UBR4 397 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 C19orf25Q9UFG5 118 aaPredicted RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 MRTO4Q9UKD2 239 aaKnown RBP3.16□□□□□ -1.9
CLCC1-209ENST00000482889 GRID1Q9ULK0 1009 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 MGAT4BQ9UQ53 548 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 SMC3Q9UQE7 1217 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 PCDHGB1Q9Y5G3 927 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 U3KQV3 271 aa3.16□□□□□ -1.9
CLCC1-209ENST00000482889 CLRN2A0PK11 232 aa3.15□□□□□ -1.91
CLCC1-209ENST00000482889 A8MU76 341 aa3.15□□□□□ -1.91
CLCC1-209ENST00000482889 GPR89AB7ZAQ6 455 aa3.15□□□□□ -1.91
CLCC1-209ENST00000482889 NPIPB9F8W1W9 429 aa3.15□□□□□ -1.91
CLCC1-209ENST00000482889 H0YCG3 227 aa3.15□□□□□ -1.91
CLCC1-209ENST00000482889 AP3B1O00203 1094 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms