RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 CYR61O00622 381 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 POLR1CO15160 346 aaPredicted RBP16.58■□□□□ 0.24
UPF3A-206ENST00000480362 KCNH1O95259 989 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 CPSF4O95639 269 aaKnown RBP16.58■□□□□ 0.24
UPF3A-206ENST00000480362 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 RNH1P13489 461 aaKnown RBP16.58■□□□□ 0.24
UPF3A-206ENST00000480362 TSPAN7P41732 249 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 OR1D4P47884 311 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 SIM1P81133 766 aaPredicted RBP16.58■□□□□ 0.24
UPF3A-206ENST00000480362 SYT16Q17RD7 645 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 C1orf189Q5VU69 101 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 RHBDD2Q6NTF9 364 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 PRMT9Q6P2P2 845 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 DHDDSQ86SQ9 333 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 CLECL1Q8IZS7 167 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 DNAJB14Q8TBM8 379 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.58■□□□□ 0.24
UPF3A-206ENST00000480362 COL26A1Q96A83 441 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 MIEF2Q96C03 454 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 LRRC58Q96CX6 371 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 PEX11GQ96HA9 241 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 DEPDC7Q96QD5 511 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 ZNF304Q9HCX3 659 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 SLC35C2Q9NQQ7 365 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 NDE1Q9NXR1 346 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 SLC39A1Q9NY26 324 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 RAPGEFL1Q9UHV5 662 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 BTNL2Q9UIR0 455 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 PSME2Q9UL46 239 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 MAN2B2Q9Y2E5 1009 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 LOXL2Q9Y4K0 774 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 PCDHB3Q9Y5E6 796 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 MUC6Q6W4X9 2439 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 A0A1W2PRB8 838 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 TM4SF5O14894 197 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 GSC2O15499 205 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 PDPK1O15530 556 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 ERAL1O75616 437 aaKnown RBP16.57■□□□□ 0.24
UPF3A-206ENST00000480362 DKK1O94907 266 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 NPPAP01160 153 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 FTH1P19P0C7X4 201 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 TRPC1P48995 793 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 HNRNPFP52597 415 aaKnown RBP16.57■□□□□ 0.24
UPF3A-206ENST00000480362 PCBP4P57723 403 aaKnown RBP16.57■□□□□ 0.24
UPF3A-206ENST00000480362 PSME3P61289 254 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 LRRC74AQ0VAA2 488 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 CAPRIN1Q14444 709 aaKnown RBP16.57■□□□□ 0.24
UPF3A-206ENST00000480362 TRMT5Q32P41 509 aaKnown RBP16.57■□□□□ 0.24
UPF3A-206ENST00000480362 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.57■□□□□ 0.24
UPF3A-206ENST00000480362 DNAL1Q4LDG9 190 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 HES3Q5TGS1 186 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 OR52E8Q6IFG1 317 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 DLEU7Q6UYE1 221 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 DEFB107AQ8IZN7 70 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 PGAM4Q8N0Y7 254 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 SLC38A9Q8NBW4 561 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 TMEM52Q8NDY8 209 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 OR51Q1Q8NH59 317 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 CLIP3Q96DZ5 547 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 LIN37Q96GY3 246 aaPredicted RBP16.57■□□□□ 0.24
UPF3A-206ENST00000480362 CCDC115Q96NT0 180 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 YIPF2Q9BWQ6 316 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 CADM1Q9BY67 442 aaKnown RBP16.57■□□□□ 0.24
UPF3A-206ENST00000480362 PAIP1Q9H074 479 aaKnown RBP16.57■□□□□ 0.24
UPF3A-206ENST00000480362 PRDM9Q9NQV7 894 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 PCDHGA7Q9Y5G6 932 aa16.57■□□□□ 0.24
UPF3A-206ENST00000480362 A0A096LPI6 279 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 FXYD1O00168 92 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 RFXANKO14593 260 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 ERN1O75460 977 aaKnown RBP16.56■□□□□ 0.24
UPF3A-206ENST00000480362 DNAJC8O75937 253 aaPredicted RBP16.56■□□□□ 0.24
UPF3A-206ENST00000480362 C6orf47O95873 294 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 NTRK1P04629 796 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 GSNP06396 782 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 HBQ1P09105 142 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 C8orf89P0DMQ9 161 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 ITIH1P19827 911 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 FBLP22087 321 aaKnown RBP16.56■□□□□ 0.24
UPF3A-206ENST00000480362 FRKP42685 505 aaPredicted RBP16.56■□□□□ 0.24
UPF3A-206ENST00000480362 CDKN2CP42773 168 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 DSG2Q14126 1118 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 ERV3-1Q14264 604 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 ZNF750Q32MQ0 723 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 C8orf82Q6P1X6 216 aaPredicted RBP16.56■□□□□ 0.24
UPF3A-206ENST00000480362 RAB11FIP2Q7L804 512 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 OR4N5Q8IXE1 308 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 OR4K14Q8NGD5 310 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 OR4A15Q8NGL6 344 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 DNAJB8Q8NHS0 232 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 ADAMTS18Q8TE60 1221 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 TANKQ92844 425 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 PANX1Q96RD7 426 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 BBS4Q96RK4 519 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 HOPXQ9BPY8 73 aaPredicted RBP16.56■□□□□ 0.24
UPF3A-206ENST00000480362 GPATCH1Q9BRR8 931 aaKnown RBP16.56■□□□□ 0.24
UPF3A-206ENST00000480362 SLC39A3Q9BRY0 314 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 RBCK1Q9BYM8 510 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 SLAMF7Q9NQ25 335 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 GIMAP4Q9NUV9 329 aa16.56■□□□□ 0.24
UPF3A-206ENST00000480362 PCDHGB4Q9UN71 923 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms